Protein–RNA interactions for Protein: P28749

RBL1, Retinoblastoma-like protein 1, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBL1P28749 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RBL1P28749 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.29■□□□□ 0.52
RBL1P28749 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RBL1P28749 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.29■□□□□ 0.52
RBL1P28749 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RBL1P28749 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.29■□□□□ 0.52
RBL1P28749 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.29■□□□□ 0.52
RBL1P28749 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RBL1P28749 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RBL1P28749 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
RBL1P28749 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RBL1P28749 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.29■□□□□ 0.52
RBL1P28749 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RBL1P28749 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.29■□□□□ 0.52
RBL1P28749 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RBL1P28749 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RBL1P28749 RCN1P1-201ENST00000400413 996 ntBASIC18.29■□□□□ 0.52
RBL1P28749 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.29■□□□□ 0.52
RBL1P28749 SPDYE13P-201ENST00000445314 798 ntBASIC18.29■□□□□ 0.52
RBL1P28749 AC063952.2-201ENST00000498792 1227 ntBASIC18.29■□□□□ 0.52
RBL1P28749 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RBL1P28749 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18.29■□□□□ 0.52
RBL1P28749 RN7SL850P-201ENST00000579959 291 ntBASIC18.29■□□□□ 0.52
RBL1P28749 AC005332.3-201ENST00000589904 676 ntBASIC18.29■□□□□ 0.52
RBL1P28749 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.29■□□□□ 0.52
RBL1P28749 GPR32P1-201ENST00000601788 811 ntBASIC18.29■□□□□ 0.52
RBL1P28749 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RBL1P28749 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RBL1P28749 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RBL1P28749 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RBL1P28749 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RBL1P28749 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.29■□□□□ 0.52
RBL1P28749 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
RBL1P28749 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RBL1P28749 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RBL1P28749 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RBL1P28749 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RBL1P28749 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.28■□□□□ 0.52
RBL1P28749 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RBL1P28749 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RBL1P28749 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.28■□□□□ 0.52
RBL1P28749 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
RBL1P28749 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RBL1P28749 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
RBL1P28749 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RBL1P28749 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RBL1P28749 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RBL1P28749 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.28■□□□□ 0.52
RBL1P28749 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RBL1P28749 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.28■□□□□ 0.52
RBL1P28749 DDX43P3-201ENST00000441064 443 ntBASIC18.28■□□□□ 0.52
RBL1P28749 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.28■□□□□ 0.52
RBL1P28749 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RBL1P28749 RNF126P1-202ENST00000569893 925 ntBASIC18.28■□□□□ 0.52
RBL1P28749 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.28■□□□□ 0.52
RBL1P28749 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RBL1P28749 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
RBL1P28749 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.28■□□□□ 0.52
RBL1P28749 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RBL1P28749 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RBL1P28749 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
RBL1P28749 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RBL1P28749 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RBL1P28749 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RBL1P28749 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
RBL1P28749 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.28■□□□□ 0.52
RBL1P28749 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.28■□□□□ 0.52
RBL1P28749 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.27■□□□□ 0.52
RBL1P28749 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
RBL1P28749 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RBL1P28749 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.27■□□□□ 0.52
RBL1P28749 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.27■□□□□ 0.52
RBL1P28749 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RBL1P28749 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.27■□□□□ 0.52
RBL1P28749 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.27■□□□□ 0.52
RBL1P28749 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.27■□□□□ 0.52
RBL1P28749 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.27■□□□□ 0.52
RBL1P28749 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RBL1P28749 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RBL1P28749 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.27■□□□□ 0.52
RBL1P28749 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RBL1P28749 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.27■□□□□ 0.52
RBL1P28749 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RBL1P28749 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.27■□□□□ 0.52
RBL1P28749 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.27■□□□□ 0.52
RBL1P28749 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RBL1P28749 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.27■□□□□ 0.52
RBL1P28749 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
RBL1P28749 AC083849.1-201ENST00000615227 514 ntBASIC18.27■□□□□ 0.52
RBL1P28749 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
RBL1P28749 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
RBL1P28749 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RBL1P28749 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.27■□□□□ 0.51
RBL1P28749 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RBL1P28749 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RBL1P28749 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RBL1P28749 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RBL1P28749 HLA-J-201ENST00000462773 1622 ntBASIC18.27■□□□□ 0.51
RBL1P28749 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
RBL1P28749 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms