Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 CABP2-204ENST00000636477 941 ntTSL 5 BASIC15.65■□□□□ 0.1
RAB3BP20337 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB3BP20337 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC15.65■□□□□ 0.1
RAB3BP20337 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB3BP20337 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RAB3BP20337 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RAB3BP20337 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
RAB3BP20337 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB3BP20337 PCDHB19P-201ENST00000570871 2371 ntBASIC15.65■□□□□ 0.1
RAB3BP20337 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB3BP20337 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC15.65■□□□□ 0.1
RAB3BP20337 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC15.65■□□□□ 0.1
RAB3BP20337 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC15.65■□□□□ 0.1
RAB3BP20337 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
RAB3BP20337 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB3BP20337 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB3BP20337 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC15.65■□□□□ 0.1
RAB3BP20337 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB3BP20337 TPR-209ENST00000613151 2478 ntTSL 5 BASIC15.65■□□□□ 0.1
RAB3BP20337 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.1
RAB3BP20337 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC15.64■□□□□ 0.1
RAB3BP20337 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.09
RAB3BP20337 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RAB3BP20337 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
RAB3BP20337 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
RAB3BP20337 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RAB3BP20337 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
RAB3BP20337 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RAB3BP20337 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
RAB3BP20337 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RAB3BP20337 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RAB3BP20337 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RAB3BP20337 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RAB3BP20337 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RAB3BP20337 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RAB3BP20337 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RAB3BP20337 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
RAB3BP20337 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
RAB3BP20337 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC15.64■□□□□ 0.09
RAB3BP20337 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RAB3BP20337 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15.64■□□□□ 0.09
RAB3BP20337 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RAB3BP20337 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC15.64■□□□□ 0.09
RAB3BP20337 B3GAT3P1-201ENST00000471720 806 ntBASIC15.64■□□□□ 0.09
RAB3BP20337 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC15.64■□□□□ 0.09
RAB3BP20337 KRT8P7-201ENST00000533003 1432 ntBASIC15.64■□□□□ 0.09
RAB3BP20337 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
RAB3BP20337 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC15.64■□□□□ 0.09
RAB3BP20337 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
RAB3BP20337 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RAB3BP20337 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.09
RAB3BP20337 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC15.64■□□□□ 0.09
RAB3BP20337 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RAB3BP20337 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RAB3BP20337 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
RAB3BP20337 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RAB3BP20337 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RAB3BP20337 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
RAB3BP20337 AC022898.2-201ENST00000616822 1312 ntBASIC15.64■□□□□ 0.09
RAB3BP20337 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC15.64■□□□□ 0.09
RAB3BP20337 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
RAB3BP20337 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
RAB3BP20337 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RAB3BP20337 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RAB3BP20337 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RAB3BP20337 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RAB3BP20337 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RAB3BP20337 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.63■□□□□ 0.09
RAB3BP20337 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
RAB3BP20337 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC15.63■□□□□ 0.09
RAB3BP20337 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RAB3BP20337 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RAB3BP20337 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RAB3BP20337 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RAB3BP20337 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC15.63■□□□□ 0.09
RAB3BP20337 AC105020.1-201ENST00000435356 2205 ntBASIC15.63■□□□□ 0.09
RAB3BP20337 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC15.63■□□□□ 0.09
RAB3BP20337 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RAB3BP20337 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC15.63■□□□□ 0.09
RAB3BP20337 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.63■□□□□ 0.09
RAB3BP20337 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
RAB3BP20337 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RAB3BP20337 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RAB3BP20337 KRT18P23-201ENST00000435622 1283 ntBASIC15.63■□□□□ 0.09
RAB3BP20337 AC026366.1-201ENST00000488803 879 ntBASIC15.63■□□□□ 0.09
RAB3BP20337 FDX2-207ENST00000494368 584 ntTSL 4 BASIC15.63■□□□□ 0.09
RAB3BP20337 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC15.63■□□□□ 0.09
RAB3BP20337 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC15.63■□□□□ 0.09
RAB3BP20337 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
RAB3BP20337 AP000692.2-201ENST00000608391 879 ntBASIC15.63■□□□□ 0.09
RAB3BP20337 AL109923.1-201ENST00000618799 583 ntBASIC15.63■□□□□ 0.09
RAB3BP20337 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.63■□□□□ 0.09
RAB3BP20337 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RAB3BP20337 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RAB3BP20337 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC15.63■□□□□ 0.09
RAB3BP20337 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RAB3BP20337 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
RAB3BP20337 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
RAB3BP20337 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC15.63■□□□□ 0.09
RAB3BP20337 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms