Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 BCL2-203ENST00000589955 5011 ntBASIC20.93■□□□□ 0.94
TOP1P11387 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
TOP1P11387 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC20.93■□□□□ 0.94
TOP1P11387 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
TOP1P11387 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
TOP1P11387 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TOP1P11387 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC20.93■□□□□ 0.94
TOP1P11387 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
TOP1P11387 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TOP1P11387 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
TOP1P11387 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TOP1P11387 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC20.92■□□□□ 0.94
TOP1P11387 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
TOP1P11387 REXO1L9P-201ENST00000604264 2108 ntBASIC20.92■□□□□ 0.94
TOP1P11387 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
TOP1P11387 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
TOP1P11387 RCN1P2-201ENST00000398357 915 ntBASIC20.92■□□□□ 0.94
TOP1P11387 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
TOP1P11387 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC20.92■□□□□ 0.94
TOP1P11387 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC20.92■□□□□ 0.94
TOP1P11387 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TOP1P11387 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TOP1P11387 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC20.92■□□□□ 0.94
TOP1P11387 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TOP1P11387 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
TOP1P11387 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TOP1P11387 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TOP1P11387 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TOP1P11387 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TOP1P11387 AC068880.1-201ENST00000507289 2297 ntBASIC20.92■□□□□ 0.94
TOP1P11387 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC20.92■□□□□ 0.94
TOP1P11387 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
TOP1P11387 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
TOP1P11387 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
TOP1P11387 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC20.91■□□□□ 0.94
TOP1P11387 DFFB-203ENST00000341385 572 ntTSL 5 BASIC20.91■□□□□ 0.94
TOP1P11387 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
TOP1P11387 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TOP1P11387 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
TOP1P11387 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TOP1P11387 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
TOP1P11387 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC20.91■□□□□ 0.94
TOP1P11387 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC20.91■□□□□ 0.94
TOP1P11387 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC20.91■□□□□ 0.94
TOP1P11387 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC20.91■□□□□ 0.94
TOP1P11387 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC20.91■□□□□ 0.94
TOP1P11387 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC20.91■□□□□ 0.94
TOP1P11387 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC20.91■□□□□ 0.94
TOP1P11387 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
TOP1P11387 AC011467.2-201ENST00000598425 242 ntBASIC20.91■□□□□ 0.94
TOP1P11387 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC20.91■□□□□ 0.94
TOP1P11387 AL591684.3-201ENST00000605187 298 ntBASIC20.91■□□□□ 0.94
TOP1P11387 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TOP1P11387 AC097374.2-201ENST00000618617 1306 ntBASIC20.91■□□□□ 0.94
TOP1P11387 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC20.91■□□□□ 0.94
TOP1P11387 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC20.9■□□□□ 0.94
TOP1P11387 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC20.9■□□□□ 0.94
TOP1P11387 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC20.9■□□□□ 0.94
TOP1P11387 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
TOP1P11387 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
TOP1P11387 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
TOP1P11387 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
TOP1P11387 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
TOP1P11387 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC20.9■□□□□ 0.94
TOP1P11387 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC20.9■□□□□ 0.94
TOP1P11387 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TOP1P11387 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC20.9■□□□□ 0.94
TOP1P11387 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC20.9■□□□□ 0.94
TOP1P11387 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
TOP1P11387 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC20.9■□□□□ 0.94
TOP1P11387 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
TOP1P11387 AC004870.1-201ENST00000315132 882 ntBASIC20.9■□□□□ 0.94
TOP1P11387 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TOP1P11387 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC20.9■□□□□ 0.94
TOP1P11387 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC20.9■□□□□ 0.94
TOP1P11387 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC20.9■□□□□ 0.94
TOP1P11387 EMBP1-201ENST00000458200 901 ntBASIC20.9■□□□□ 0.94
TOP1P11387 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC20.9■□□□□ 0.94
TOP1P11387 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC20.9■□□□□ 0.94
TOP1P11387 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC20.9■□□□□ 0.94
TOP1P11387 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
TOP1P11387 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TOP1P11387 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TOP1P11387 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC20.9■□□□□ 0.94
TOP1P11387 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
TOP1P11387 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TOP1P11387 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
TOP1P11387 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
TOP1P11387 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC20.9■□□□□ 0.94
TOP1P11387 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC20.9■□□□□ 0.94
TOP1P11387 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
TOP1P11387 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TOP1P11387 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
TOP1P11387 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TOP1P11387 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TOP1P11387 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TOP1P11387 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
TOP1P11387 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TOP1P11387 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TOP1P11387 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms