Protein–RNA interactions for Protein: P10586

PTPRF, Receptor-type tyrosine-protein phosphatase F, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRFP10586 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC20.29■□□□□ 0.84
PTPRFP10586 AL353135.1-201ENST00000606729 504 ntBASIC20.29■□□□□ 0.84
PTPRFP10586 KRT18P28-201ENST00000453838 1332 ntBASIC20.29■□□□□ 0.84
PTPRFP10586 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC20.28■□□□□ 0.84
PTPRFP10586 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PTPRFP10586 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PTPRFP10586 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.28■□□□□ 0.84
PTPRFP10586 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
PTPRFP10586 AL139400.1-201ENST00000366220 510 ntBASIC20.28■□□□□ 0.84
PTPRFP10586 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PTPRFP10586 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC20.28■□□□□ 0.84
PTPRFP10586 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC20.28■□□□□ 0.84
PTPRFP10586 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC20.28■□□□□ 0.84
PTPRFP10586 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC20.28■□□□□ 0.84
PTPRFP10586 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC20.28■□□□□ 0.84
PTPRFP10586 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PTPRFP10586 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PTPRFP10586 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PTPRFP10586 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
PTPRFP10586 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC20.28■□□□□ 0.84
PTPRFP10586 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PTPRFP10586 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PTPRFP10586 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC20.28■□□□□ 0.84
PTPRFP10586 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC20.28■□□□□ 0.84
PTPRFP10586 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
PTPRFP10586 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PTPRFP10586 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PTPRFP10586 CALY-203ENST00000368558 825 ntTSL 5 BASIC20.27■□□□□ 0.84
PTPRFP10586 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
PTPRFP10586 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC20.27■□□□□ 0.84
PTPRFP10586 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC20.27■□□□□ 0.84
PTPRFP10586 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC20.27■□□□□ 0.84
PTPRFP10586 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC20.27■□□□□ 0.84
PTPRFP10586 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC20.27■□□□□ 0.84
PTPRFP10586 AC093512.1-201ENST00000617969 520 ntBASIC20.27■□□□□ 0.84
PTPRFP10586 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
PTPRFP10586 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PTPRFP10586 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
PTPRFP10586 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC20.27■□□□□ 0.84
PTPRFP10586 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PTPRFP10586 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC20.27■□□□□ 0.84
PTPRFP10586 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PTPRFP10586 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PTPRFP10586 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
PTPRFP10586 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC20.27■□□□□ 0.84
PTPRFP10586 FAM58CP-201ENST00000435741 640 ntBASIC20.27■□□□□ 0.84
PTPRFP10586 CEND1P1-201ENST00000451006 455 ntBASIC20.27■□□□□ 0.84
PTPRFP10586 FLYWCH1P1-201ENST00000460917 1874 ntBASIC20.27■□□□□ 0.84
PTPRFP10586 AP002472.1-201ENST00000577490 586 ntBASIC20.27■□□□□ 0.84
PTPRFP10586 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PTPRFP10586 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTPRFP10586 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
PTPRFP10586 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
PTPRFP10586 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTPRFP10586 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
PTPRFP10586 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTPRFP10586 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
PTPRFP10586 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC20.26■□□□□ 0.83
PTPRFP10586 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC20.26■□□□□ 0.83
PTPRFP10586 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC20.26■□□□□ 0.83
PTPRFP10586 AC011467.4-201ENST00000594891 528 ntBASIC20.26■□□□□ 0.83
PTPRFP10586 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC20.26■□□□□ 0.83
PTPRFP10586 MED16-214ENST00000617672 554 ntTSL 5 BASIC20.26■□□□□ 0.83
PTPRFP10586 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTPRFP10586 AC097637.2-201ENST00000624096 1997 ntBASIC20.26■□□□□ 0.83
PTPRFP10586 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
PTPRFP10586 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
PTPRFP10586 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTPRFP10586 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTPRFP10586 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTPRFP10586 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PTPRFP10586 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC20.26■□□□□ 0.83
PTPRFP10586 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
PTPRFP10586 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC20.26■□□□□ 0.83
PTPRFP10586 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PTPRFP10586 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PTPRFP10586 SNHG9-202ENST00000564014 471 ntBASIC20.25■□□□□ 0.83
PTPRFP10586 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC20.25■□□□□ 0.83
PTPRFP10586 AC093028.1-201ENST00000622998 982 ntBASIC20.25■□□□□ 0.83
PTPRFP10586 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.25■□□□□ 0.83
PTPRFP10586 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
PTPRFP10586 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC20.25■□□□□ 0.83
PTPRFP10586 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC20.25■□□□□ 0.83
PTPRFP10586 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PTPRFP10586 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.25■□□□□ 0.83
PTPRFP10586 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.25■□□□□ 0.83
PTPRFP10586 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
PTPRFP10586 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PTPRFP10586 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
PTPRFP10586 AC023141.5-201ENST00000458585 616 ntBASIC20.25■□□□□ 0.83
PTPRFP10586 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC20.25■□□□□ 0.83
PTPRFP10586 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
PTPRFP10586 AC022145.2-201ENST00000598203 171 ntBASIC20.25■□□□□ 0.83
PTPRFP10586 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PTPRFP10586 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PTPRFP10586 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC20.25■□□□□ 0.83
PTPRFP10586 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
PTPRFP10586 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PTPRFP10586 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PTPRFP10586 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms