Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
FREM3P0C091 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
FREM3P0C091 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
FREM3P0C091 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
FREM3P0C091 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
FREM3P0C091 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.17■□□□□ 0.18
FREM3P0C091 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.17■□□□□ 0.18
FREM3P0C091 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC16.17■□□□□ 0.18
FREM3P0C091 SAPCD2P3-201ENST00000455031 850 ntBASIC16.17■□□□□ 0.18
FREM3P0C091 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.17■□□□□ 0.18
FREM3P0C091 RNA5SP419-201ENST00000515908 135 ntBASIC16.17■□□□□ 0.18
FREM3P0C091 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.17■□□□□ 0.18
FREM3P0C091 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC16.17■□□□□ 0.18
FREM3P0C091 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
FREM3P0C091 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
FREM3P0C091 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
FREM3P0C091 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
FREM3P0C091 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
FREM3P0C091 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.17■□□□□ 0.18
FREM3P0C091 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.17■□□□□ 0.18
FREM3P0C091 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
FREM3P0C091 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
FREM3P0C091 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
FREM3P0C091 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.17■□□□□ 0.18
FREM3P0C091 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
FREM3P0C091 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.17■□□□□ 0.18
FREM3P0C091 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC16.16■□□□□ 0.18
FREM3P0C091 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
FREM3P0C091 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
FREM3P0C091 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
FREM3P0C091 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
FREM3P0C091 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.16■□□□□ 0.18
FREM3P0C091 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC16.16■□□□□ 0.18
FREM3P0C091 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.16■□□□□ 0.18
FREM3P0C091 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
FREM3P0C091 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.16■□□□□ 0.18
FREM3P0C091 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
FREM3P0C091 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
FREM3P0C091 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
FREM3P0C091 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
FREM3P0C091 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
FREM3P0C091 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
FREM3P0C091 REXO1L11P-201ENST00000620964 1927 ntBASIC16.16■□□□□ 0.18
FREM3P0C091 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
FREM3P0C091 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
FREM3P0C091 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
FREM3P0C091 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
FREM3P0C091 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
FREM3P0C091 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
FREM3P0C091 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.16■□□□□ 0.18
FREM3P0C091 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
FREM3P0C091 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.16■□□□□ 0.18
FREM3P0C091 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
FREM3P0C091 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
FREM3P0C091 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
FREM3P0C091 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
FREM3P0C091 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.16■□□□□ 0.18
FREM3P0C091 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.16■□□□□ 0.18
FREM3P0C091 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
FREM3P0C091 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.16■□□□□ 0.18
FREM3P0C091 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.16■□□□□ 0.18
FREM3P0C091 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.16■□□□□ 0.18
FREM3P0C091 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.16■□□□□ 0.18
FREM3P0C091 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC16.16■□□□□ 0.18
FREM3P0C091 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
FREM3P0C091 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
FREM3P0C091 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
FREM3P0C091 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
FREM3P0C091 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
FREM3P0C091 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
FREM3P0C091 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
FREM3P0C091 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
FREM3P0C091 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
FREM3P0C091 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
FREM3P0C091 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
FREM3P0C091 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
FREM3P0C091 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.15■□□□□ 0.18
FREM3P0C091 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
FREM3P0C091 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.15■□□□□ 0.18
FREM3P0C091 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.15■□□□□ 0.18
FREM3P0C091 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.15■□□□□ 0.18
FREM3P0C091 AC008687.5-201ENST00000593746 558 ntBASIC16.15■□□□□ 0.18
FREM3P0C091 IGHV3-41-201ENST00000613121 348 ntBASIC16.15■□□□□ 0.18
FREM3P0C091 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
FREM3P0C091 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
FREM3P0C091 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.15■□□□□ 0.18
FREM3P0C091 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
FREM3P0C091 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
FREM3P0C091 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
FREM3P0C091 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
FREM3P0C091 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
FREM3P0C091 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
FREM3P0C091 HLA-A-201ENST00000376802 1334 ntBASIC16.15■□□□□ 0.18
FREM3P0C091 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
FREM3P0C091 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.15■□□□□ 0.18
FREM3P0C091 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
FREM3P0C091 INTS4P1-201ENST00000438455 1935 ntBASIC16.15■□□□□ 0.18
FREM3P0C091 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
FREM3P0C091 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
FREM3P0C091 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms