Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CD48P09326 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CD48P09326 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CD48P09326 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CD48P09326 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CD48P09326 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.47■□□□□ 0.55
CD48P09326 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.46■□□□□ 0.55
CD48P09326 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CD48P09326 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.46■□□□□ 0.55
CD48P09326 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.46■□□□□ 0.55
CD48P09326 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CD48P09326 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CD48P09326 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
CD48P09326 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
CD48P09326 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.46■□□□□ 0.55
CD48P09326 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.46■□□□□ 0.55
CD48P09326 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CD48P09326 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
CD48P09326 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CD48P09326 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CD48P09326 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CD48P09326 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CD48P09326 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.46■□□□□ 0.55
CD48P09326 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.46■□□□□ 0.55
CD48P09326 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.46■□□□□ 0.55
CD48P09326 LINC01238-205ENST00000567549 1107 ntBASIC18.46■□□□□ 0.55
CD48P09326 NTF6B-201ENST00000591913 560 ntBASIC18.46■□□□□ 0.55
CD48P09326 AC116407.2-201ENST00000613639 860 ntBASIC18.46■□□□□ 0.55
CD48P09326 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CD48P09326 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CD48P09326 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CD48P09326 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.46■□□□□ 0.55
CD48P09326 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CD48P09326 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.46■□□□□ 0.55
CD48P09326 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CD48P09326 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CD48P09326 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CD48P09326 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.54
CD48P09326 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CD48P09326 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CD48P09326 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.45■□□□□ 0.54
CD48P09326 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CD48P09326 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CD48P09326 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
CD48P09326 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
CD48P09326 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CD48P09326 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CD48P09326 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CD48P09326 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
CD48P09326 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.45■□□□□ 0.54
CD48P09326 FAM210CP-201ENST00000445714 574 ntBASIC18.45■□□□□ 0.54
CD48P09326 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CD48P09326 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.45■□□□□ 0.54
CD48P09326 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.45■□□□□ 0.54
CD48P09326 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.45■□□□□ 0.54
CD48P09326 AL049597.2-201ENST00000565575 961 ntBASIC18.45■□□□□ 0.54
CD48P09326 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.45■□□□□ 0.54
CD48P09326 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC18.45■□□□□ 0.54
CD48P09326 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.45■□□□□ 0.54
CD48P09326 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.45■□□□□ 0.54
CD48P09326 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CD48P09326 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
CD48P09326 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
CD48P09326 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CD48P09326 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CD48P09326 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CD48P09326 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
CD48P09326 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CD48P09326 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
CD48P09326 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
CD48P09326 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.44■□□□□ 0.54
CD48P09326 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CD48P09326 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
CD48P09326 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.44■□□□□ 0.54
CD48P09326 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CD48P09326 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CD48P09326 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CD48P09326 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.44■□□□□ 0.54
CD48P09326 BAALC-202ENST00000306391 243 ntTSL 5 BASIC18.44■□□□□ 0.54
CD48P09326 BAALC-204ENST00000330955 222 ntTSL 5 BASIC18.44■□□□□ 0.54
CD48P09326 TSPY22P-201ENST00000427496 604 ntBASIC18.44■□□□□ 0.54
CD48P09326 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC18.44■□□□□ 0.54
CD48P09326 DDX43P3-201ENST00000441064 443 ntBASIC18.44■□□□□ 0.54
CD48P09326 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC18.44■□□□□ 0.54
CD48P09326 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
CD48P09326 AL136038.3-201ENST00000561909 1096 ntBASIC18.44■□□□□ 0.54
CD48P09326 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CD48P09326 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CD48P09326 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CD48P09326 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
CD48P09326 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.44■□□□□ 0.54
CD48P09326 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CD48P09326 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CD48P09326 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
CD48P09326 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
CD48P09326 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CD48P09326 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.44■□□□□ 0.54
CD48P09326 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CD48P09326 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.43■□□□□ 0.54
CD48P09326 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms