Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 METTL26-205ENST00000397666 726 ntTSL 2 BASIC18.38■□□□□ 0.53
RHOP08100 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC18.38■□□□□ 0.53
RHOP08100 COA5-202ENST00000409997 557 ntTSL 4 BASIC18.38■□□□□ 0.53
RHOP08100 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC18.38■□□□□ 0.53
RHOP08100 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC18.38■□□□□ 0.53
RHOP08100 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC18.38■□□□□ 0.53
RHOP08100 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC18.38■□□□□ 0.53
RHOP08100 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC18.38■□□□□ 0.53
RHOP08100 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC18.38■□□□□ 0.53
RHOP08100 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.38■□□□□ 0.53
RHOP08100 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC18.38■□□□□ 0.53
RHOP08100 AC019129.2-201ENST00000609837 1235 ntBASIC18.38■□□□□ 0.53
RHOP08100 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC18.38■□□□□ 0.53
RHOP08100 AC134684.3-201ENST00000641758 218 ntBASIC18.38■□□□□ 0.53
RHOP08100 AC079781.4-201ENST00000641908 219 ntBASIC18.38■□□□□ 0.53
RHOP08100 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.38■□□□□ 0.53
RHOP08100 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RHOP08100 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
RHOP08100 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RHOP08100 NCF1C-201ENST00000438382 1427 ntBASIC18.38■□□□□ 0.53
RHOP08100 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.38■□□□□ 0.53
RHOP08100 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.38■□□□□ 0.53
RHOP08100 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
RHOP08100 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RHOP08100 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RHOP08100 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RHOP08100 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.37■□□□□ 0.53
RHOP08100 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RHOP08100 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.37■□□□□ 0.53
RHOP08100 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RHOP08100 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RHOP08100 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RHOP08100 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RHOP08100 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RHOP08100 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RHOP08100 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RHOP08100 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
RHOP08100 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RHOP08100 GGCT-205ENST00000409436 954 ntTSL 3 BASIC18.37■□□□□ 0.53
RHOP08100 SIGLEC30P-201ENST00000455569 941 ntBASIC18.37■□□□□ 0.53
RHOP08100 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC18.37■□□□□ 0.53
RHOP08100 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC18.37■□□□□ 0.53
RHOP08100 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
RHOP08100 AC109462.3-201ENST00000573934 613 ntBASIC18.37■□□□□ 0.53
RHOP08100 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC18.37■□□□□ 0.53
RHOP08100 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RHOP08100 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RHOP08100 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC18.37■□□□□ 0.53
RHOP08100 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RHOP08100 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.37■□□□□ 0.53
RHOP08100 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.37■□□□□ 0.53
RHOP08100 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RHOP08100 AC100803.2-201ENST00000562459 1963 ntBASIC18.37■□□□□ 0.53
RHOP08100 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RHOP08100 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
RHOP08100 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
RHOP08100 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.37■□□□□ 0.53
RHOP08100 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
RHOP08100 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RHOP08100 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RHOP08100 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RHOP08100 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RHOP08100 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RHOP08100 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
RHOP08100 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RHOP08100 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
RHOP08100 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.36■□□□□ 0.53
RHOP08100 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.36■□□□□ 0.53
RHOP08100 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
RHOP08100 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.36■□□□□ 0.53
RHOP08100 CRYGEP-201ENST00000412192 528 ntBASIC18.36■□□□□ 0.53
RHOP08100 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC18.36■□□□□ 0.53
RHOP08100 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC18.36■□□□□ 0.53
RHOP08100 URGCP-206ENST00000446958 365 ntTSL 2 BASIC18.36■□□□□ 0.53
RHOP08100 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RHOP08100 S100A2-206ENST00000497140 697 ntTSL 2 BASIC18.36■□□□□ 0.53
RHOP08100 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RHOP08100 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC18.36■□□□□ 0.53
RHOP08100 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC18.36■□□□□ 0.53
RHOP08100 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RHOP08100 AC116407.2-201ENST00000613639 860 ntBASIC18.36■□□□□ 0.53
RHOP08100 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.36■□□□□ 0.53
RHOP08100 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RHOP08100 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
RHOP08100 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RHOP08100 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RHOP08100 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RHOP08100 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RHOP08100 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RHOP08100 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RHOP08100 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RHOP08100 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.35■□□□□ 0.53
RHOP08100 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.35■□□□□ 0.53
RHOP08100 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RHOP08100 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
RHOP08100 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RHOP08100 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.35■□□□□ 0.53
RHOP08100 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RHOP08100 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RHOP08100 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms