Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CTSDP07339 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CTSDP07339 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CTSDP07339 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CTSDP07339 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CTSDP07339 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC14.81□□□□□ -0.04
CTSDP07339 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
CTSDP07339 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC14.81□□□□□ -0.04
CTSDP07339 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CTSDP07339 AC018695.7-201ENST00000624587 2492 ntBASIC14.81□□□□□ -0.04
CTSDP07339 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
CTSDP07339 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CTSDP07339 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
CTSDP07339 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC14.81□□□□□ -0.04
CTSDP07339 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CTSDP07339 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC14.81□□□□□ -0.04
CTSDP07339 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
CTSDP07339 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CTSDP07339 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC14.81□□□□□ -0.04
CTSDP07339 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CTSDP07339 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
CTSDP07339 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC14.81□□□□□ -0.04
CTSDP07339 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
CTSDP07339 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC14.81□□□□□ -0.04
CTSDP07339 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CTSDP07339 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CTSDP07339 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
CTSDP07339 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CTSDP07339 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC14.8□□□□□ -0.04
CTSDP07339 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
CTSDP07339 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC14.8□□□□□ -0.04
CTSDP07339 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CTSDP07339 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CTSDP07339 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CTSDP07339 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CTSDP07339 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CTSDP07339 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CTSDP07339 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CTSDP07339 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CTSDP07339 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
CTSDP07339 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CTSDP07339 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CTSDP07339 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CTSDP07339 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC14.8□□□□□ -0.04
CTSDP07339 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC14.8□□□□□ -0.04
CTSDP07339 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC14.8□□□□□ -0.04
CTSDP07339 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC14.8□□□□□ -0.04
CTSDP07339 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC14.8□□□□□ -0.04
CTSDP07339 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC14.8□□□□□ -0.04
CTSDP07339 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CTSDP07339 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC14.8□□□□□ -0.04
CTSDP07339 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CTSDP07339 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC14.8□□□□□ -0.04
CTSDP07339 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC14.8□□□□□ -0.04
CTSDP07339 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CTSDP07339 WWOX-216ENST00000569818 525 ntBASIC14.8□□□□□ -0.04
CTSDP07339 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC14.8□□□□□ -0.04
CTSDP07339 CYGB-204ENST00000589342 815 ntTSL 3 BASIC14.8□□□□□ -0.04
CTSDP07339 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CTSDP07339 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC14.8□□□□□ -0.04
CTSDP07339 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC14.8□□□□□ -0.04
CTSDP07339 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CTSDP07339 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CTSDP07339 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
CTSDP07339 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC14.8□□□□□ -0.04
CTSDP07339 OS9-205ENST00000413095 1660 ntTSL 2 BASIC14.8□□□□□ -0.04
CTSDP07339 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
CTSDP07339 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CTSDP07339 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
CTSDP07339 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CTSDP07339 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC14.8□□□□□ -0.04
CTSDP07339 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
CTSDP07339 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC14.8□□□□□ -0.04
CTSDP07339 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC14.8□□□□□ -0.04
CTSDP07339 AGGF1P2-201ENST00000426656 2106 ntBASIC14.8□□□□□ -0.04
CTSDP07339 AC105020.1-201ENST00000435356 2205 ntBASIC14.8□□□□□ -0.04
CTSDP07339 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CTSDP07339 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CTSDP07339 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
CTSDP07339 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
CTSDP07339 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
CTSDP07339 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
CTSDP07339 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CTSDP07339 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
CTSDP07339 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CTSDP07339 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CTSDP07339 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CTSDP07339 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CTSDP07339 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CTSDP07339 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CTSDP07339 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CTSDP07339 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CTSDP07339 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
CTSDP07339 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
CTSDP07339 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CTSDP07339 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CTSDP07339 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
CTSDP07339 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CTSDP07339 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CTSDP07339 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms