Protein–RNA interactions for Protein: P07197

NEFM, Neurofilament medium polypeptide, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEFMP07197 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
NEFMP07197 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
NEFMP07197 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
NEFMP07197 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
NEFMP07197 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
NEFMP07197 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
NEFMP07197 AC132938.6-201ENST00000623828 1655 ntBASIC23.8■■□□□ 1.4
NEFMP07197 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
NEFMP07197 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
NEFMP07197 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
NEFMP07197 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
NEFMP07197 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
NEFMP07197 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC23.8■■□□□ 1.4
NEFMP07197 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC23.8■■□□□ 1.4
NEFMP07197 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
NEFMP07197 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
NEFMP07197 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC23.8■■□□□ 1.4
NEFMP07197 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
NEFMP07197 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC23.8■■□□□ 1.4
NEFMP07197 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC23.8■■□□□ 1.4
NEFMP07197 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC23.8■■□□□ 1.4
NEFMP07197 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC23.8■■□□□ 1.4
NEFMP07197 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC23.8■■□□□ 1.4
NEFMP07197 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC23.8■■□□□ 1.4
NEFMP07197 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
NEFMP07197 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC23.8■■□□□ 1.4
NEFMP07197 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
NEFMP07197 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
NEFMP07197 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
NEFMP07197 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
NEFMP07197 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
NEFMP07197 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
NEFMP07197 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
NEFMP07197 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
NEFMP07197 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NEFMP07197 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
NEFMP07197 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NEFMP07197 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
NEFMP07197 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
NEFMP07197 TOLLIP-AS1-201ENST00000530897 939 ntBASIC23.79■■□□□ 1.4
NEFMP07197 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NEFMP07197 AC099336.1-202ENST00000602961 463 ntBASIC23.79■■□□□ 1.4
NEFMP07197 AL353801.3-201ENST00000609898 542 ntBASIC23.79■■□□□ 1.4
NEFMP07197 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NEFMP07197 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
NEFMP07197 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
NEFMP07197 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC23.79■■□□□ 1.4
NEFMP07197 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NEFMP07197 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
NEFMP07197 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NEFMP07197 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NEFMP07197 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
NEFMP07197 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NEFMP07197 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC23.78■■□□□ 1.4
NEFMP07197 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
NEFMP07197 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC23.78■■□□□ 1.4
NEFMP07197 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
NEFMP07197 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
NEFMP07197 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
NEFMP07197 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
NEFMP07197 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
NEFMP07197 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
NEFMP07197 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
NEFMP07197 AC112698.1-201ENST00000510299 916 ntBASIC23.78■■□□□ 1.4
NEFMP07197 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC23.78■■□□□ 1.4
NEFMP07197 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC23.78■■□□□ 1.4
NEFMP07197 AL121772.3-201ENST00000610840 674 ntBASIC23.78■■□□□ 1.4
NEFMP07197 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC23.78■■□□□ 1.4
NEFMP07197 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
NEFMP07197 POR-209ENST00000439269 1858 ntTSL 2 BASIC23.78■■□□□ 1.4
NEFMP07197 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
NEFMP07197 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
NEFMP07197 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC23.78■■□□□ 1.4
NEFMP07197 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC23.78■■□□□ 1.4
NEFMP07197 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
NEFMP07197 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC23.78■■□□□ 1.4
NEFMP07197 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
NEFMP07197 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
NEFMP07197 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
NEFMP07197 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
NEFMP07197 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC23.77■■□□□ 1.4
NEFMP07197 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
NEFMP07197 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
NEFMP07197 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC23.77■■□□□ 1.4
NEFMP07197 SDHD-206ENST00000528182 754 ntTSL 3 BASIC23.77■■□□□ 1.4
NEFMP07197 LINC01711-201ENST00000598340 967 ntBASIC23.77■■□□□ 1.4
NEFMP07197 NSUN5P1-202ENST00000421140 1535 ntBASIC23.77■■□□□ 1.4
NEFMP07197 NSUN5P2-203ENST00000457352 1529 ntBASIC23.77■■□□□ 1.4
NEFMP07197 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
NEFMP07197 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
NEFMP07197 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
NEFMP07197 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC23.77■■□□□ 1.4
NEFMP07197 FLYWCH1P1-201ENST00000460917 1874 ntBASIC23.77■■□□□ 1.4
NEFMP07197 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC23.76■■□□□ 1.39
NEFMP07197 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC23.76■■□□□ 1.39
NEFMP07197 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC23.76■■□□□ 1.39
NEFMP07197 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
NEFMP07197 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
NEFMP07197 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
NEFMP07197 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms