Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
TCRAP04437 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
TCRAP04437 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
TCRAP04437 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TCRAP04437 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC13.58□□□□□ -0.24
TCRAP04437 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TCRAP04437 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TCRAP04437 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
TCRAP04437 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
TCRAP04437 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TCRAP04437 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC13.58□□□□□ -0.24
TCRAP04437 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TCRAP04437 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC13.58□□□□□ -0.24
TCRAP04437 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TCRAP04437 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC13.58□□□□□ -0.24
TCRAP04437 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC13.58□□□□□ -0.24
TCRAP04437 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
TCRAP04437 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC13.58□□□□□ -0.24
TCRAP04437 C1QBPP2-201ENST00000528754 825 ntBASIC13.58□□□□□ -0.24
TCRAP04437 AC104390.1-201ENST00000555663 520 ntBASIC13.58□□□□□ -0.24
TCRAP04437 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC13.58□□□□□ -0.24
TCRAP04437 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC13.58□□□□□ -0.24
TCRAP04437 AC116407.2-201ENST00000613639 860 ntBASIC13.58□□□□□ -0.24
TCRAP04437 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TCRAP04437 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TCRAP04437 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC13.58□□□□□ -0.24
TCRAP04437 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC13.58□□□□□ -0.24
TCRAP04437 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC13.58□□□□□ -0.24
TCRAP04437 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC13.58□□□□□ -0.24
TCRAP04437 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
TCRAP04437 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TCRAP04437 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TCRAP04437 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC13.58□□□□□ -0.24
TCRAP04437 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TCRAP04437 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
TCRAP04437 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TCRAP04437 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TCRAP04437 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
TCRAP04437 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
TCRAP04437 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
TCRAP04437 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
TCRAP04437 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC13.58□□□□□ -0.24
TCRAP04437 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
TCRAP04437 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TCRAP04437 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TCRAP04437 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
TCRAP04437 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC13.57□□□□□ -0.24
TCRAP04437 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TCRAP04437 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC13.57□□□□□ -0.24
TCRAP04437 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TCRAP04437 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TCRAP04437 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
TCRAP04437 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
TCRAP04437 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
TCRAP04437 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
TCRAP04437 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
TCRAP04437 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TCRAP04437 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TCRAP04437 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TCRAP04437 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TCRAP04437 FAM197Y1-201ENST00000421178 764 ntBASIC13.57□□□□□ -0.24
TCRAP04437 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC13.57□□□□□ -0.24
TCRAP04437 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC13.57□□□□□ -0.24
TCRAP04437 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC13.57□□□□□ -0.24
TCRAP04437 AC097488.1-201ENST00000507834 756 ntBASIC13.57□□□□□ -0.24
TCRAP04437 TK2-204ENST00000525974 1178 ntTSL 2 BASIC13.57□□□□□ -0.24
TCRAP04437 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC13.57□□□□□ -0.24
TCRAP04437 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC13.57□□□□□ -0.24
TCRAP04437 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC13.57□□□□□ -0.24
TCRAP04437 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC13.57□□□□□ -0.24
TCRAP04437 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC13.57□□□□□ -0.24
TCRAP04437 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TCRAP04437 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TCRAP04437 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TCRAP04437 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
TCRAP04437 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TCRAP04437 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TCRAP04437 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC13.57□□□□□ -0.24
TCRAP04437 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC13.57□□□□□ -0.24
TCRAP04437 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC13.57□□□□□ -0.24
TCRAP04437 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC13.57□□□□□ -0.24
TCRAP04437 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
TCRAP04437 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
TCRAP04437 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TCRAP04437 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
TCRAP04437 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
TCRAP04437 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
TCRAP04437 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
TCRAP04437 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC13.56□□□□□ -0.24
TCRAP04437 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC13.56□□□□□ -0.24
TCRAP04437 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC13.56□□□□□ -0.24
TCRAP04437 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TCRAP04437 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC13.56□□□□□ -0.24
TCRAP04437 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
TCRAP04437 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
TCRAP04437 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
TCRAP04437 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TCRAP04437 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TCRAP04437 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TCRAP04437 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms