Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC19.29■□□□□ 0.68
CHRNA1P02708 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CHRNA1P02708 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHRNA1P02708 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC19.29■□□□□ 0.68
CHRNA1P02708 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHRNA1P02708 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHRNA1P02708 KLF4P1-201ENST00000412782 1185 ntBASIC19.29■□□□□ 0.68
CHRNA1P02708 RPS8P6-201ENST00000426177 609 ntBASIC19.29■□□□□ 0.68
CHRNA1P02708 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC19.29■□□□□ 0.68
CHRNA1P02708 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC19.29■□□□□ 0.68
CHRNA1P02708 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC19.29■□□□□ 0.68
CHRNA1P02708 AC109462.3-201ENST00000573934 613 ntBASIC19.29■□□□□ 0.68
CHRNA1P02708 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC19.29■□□□□ 0.68
CHRNA1P02708 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CHRNA1P02708 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CHRNA1P02708 AC009949.1-201ENST00000623048 1830 ntBASIC19.29■□□□□ 0.68
CHRNA1P02708 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHRNA1P02708 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHRNA1P02708 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.29■□□□□ 0.68
CHRNA1P02708 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CHRNA1P02708 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHRNA1P02708 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.28■□□□□ 0.68
CHRNA1P02708 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC19.28■□□□□ 0.68
CHRNA1P02708 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CHRNA1P02708 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHRNA1P02708 AC018445.3-201ENST00000624177 1945 ntBASIC19.28■□□□□ 0.68
CHRNA1P02708 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.28■□□□□ 0.68
CHRNA1P02708 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHRNA1P02708 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CHRNA1P02708 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC19.28■□□□□ 0.68
CHRNA1P02708 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC19.28■□□□□ 0.68
CHRNA1P02708 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC19.28■□□□□ 0.68
CHRNA1P02708 TCAP-202ENST00000578283 583 ntTSL 5 BASIC19.28■□□□□ 0.68
CHRNA1P02708 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CHRNA1P02708 AC134684.3-201ENST00000641758 218 ntBASIC19.28■□□□□ 0.68
CHRNA1P02708 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.28■□□□□ 0.68
CHRNA1P02708 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHRNA1P02708 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHRNA1P02708 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.28■□□□□ 0.68
CHRNA1P02708 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHRNA1P02708 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC19.28■□□□□ 0.68
CHRNA1P02708 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHRNA1P02708 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CHRNA1P02708 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHRNA1P02708 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC19.28■□□□□ 0.68
CHRNA1P02708 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHRNA1P02708 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHRNA1P02708 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.27■□□□□ 0.68
CHRNA1P02708 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHRNA1P02708 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHRNA1P02708 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC19.27■□□□□ 0.68
CHRNA1P02708 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC19.27■□□□□ 0.68
CHRNA1P02708 NCF1C-201ENST00000438382 1427 ntBASIC19.27■□□□□ 0.68
CHRNA1P02708 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.27■□□□□ 0.68
CHRNA1P02708 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CHRNA1P02708 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CHRNA1P02708 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CHRNA1P02708 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHRNA1P02708 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
CHRNA1P02708 PC-208ENST00000529047 1607 ntTSL 3 BASIC19.27■□□□□ 0.68
CHRNA1P02708 AC003669.1-201ENST00000334569 611 ntBASIC19.27■□□□□ 0.68
CHRNA1P02708 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CHRNA1P02708 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHRNA1P02708 SIGLEC30P-201ENST00000455569 941 ntBASIC19.27■□□□□ 0.68
CHRNA1P02708 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC19.27■□□□□ 0.68
CHRNA1P02708 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC19.27■□□□□ 0.68
CHRNA1P02708 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHRNA1P02708 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC19.27■□□□□ 0.68
CHRNA1P02708 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC19.27■□□□□ 0.68
CHRNA1P02708 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC19.27■□□□□ 0.68
CHRNA1P02708 MTDHP5-201ENST00000598980 586 ntBASIC19.27■□□□□ 0.68
CHRNA1P02708 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC19.27■□□□□ 0.68
CHRNA1P02708 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHRNA1P02708 GID4-202ENST00000376345 1391 ntTSL 3 BASIC19.27■□□□□ 0.68
CHRNA1P02708 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHRNA1P02708 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHRNA1P02708 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC19.27■□□□□ 0.67
CHRNA1P02708 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
CHRNA1P02708 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
CHRNA1P02708 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.67
CHRNA1P02708 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.27■□□□□ 0.67
CHRNA1P02708 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CHRNA1P02708 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CHRNA1P02708 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.26■□□□□ 0.67
CHRNA1P02708 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC19.26■□□□□ 0.67
CHRNA1P02708 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CHRNA1P02708 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CHRNA1P02708 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
CHRNA1P02708 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHRNA1P02708 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC19.26■□□□□ 0.67
CHRNA1P02708 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
CHRNA1P02708 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC19.26■□□□□ 0.67
CHRNA1P02708 GGCT-205ENST00000409436 954 ntTSL 3 BASIC19.26■□□□□ 0.67
CHRNA1P02708 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC19.26■□□□□ 0.67
CHRNA1P02708 COA5-202ENST00000409997 557 ntTSL 4 BASIC19.26■□□□□ 0.67
CHRNA1P02708 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC19.26■□□□□ 0.67
CHRNA1P02708 AC004967.1-201ENST00000453589 447 ntBASIC19.26■□□□□ 0.67
CHRNA1P02708 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CHRNA1P02708 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC19.26■□□□□ 0.67
CHRNA1P02708 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms