Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC16.87■□□□□ 0.29
CLPTM1O96005 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC16.87■□□□□ 0.29
CLPTM1O96005 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC16.87■□□□□ 0.29
CLPTM1O96005 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CLPTM1O96005 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC16.87■□□□□ 0.29
CLPTM1O96005 MME-217ENST00000616757 1315 ntTSL 5 BASIC16.87■□□□□ 0.29
CLPTM1O96005 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.87■□□□□ 0.29
CLPTM1O96005 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.87■□□□□ 0.29
CLPTM1O96005 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLPTM1O96005 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
CLPTM1O96005 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLPTM1O96005 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.87■□□□□ 0.29
CLPTM1O96005 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
CLPTM1O96005 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CLPTM1O96005 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CLPTM1O96005 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLPTM1O96005 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLPTM1O96005 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CLPTM1O96005 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC16.87■□□□□ 0.29
CLPTM1O96005 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.87■□□□□ 0.29
CLPTM1O96005 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLPTM1O96005 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLPTM1O96005 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.87■□□□□ 0.29
CLPTM1O96005 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.86■□□□□ 0.29
CLPTM1O96005 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLPTM1O96005 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CLPTM1O96005 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.86■□□□□ 0.29
CLPTM1O96005 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CLPTM1O96005 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
CLPTM1O96005 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.86■□□□□ 0.29
CLPTM1O96005 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLPTM1O96005 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CLPTM1O96005 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLPTM1O96005 AL138688.1-201ENST00000624851 1594 ntBASIC16.86■□□□□ 0.29
CLPTM1O96005 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
CLPTM1O96005 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.86■□□□□ 0.29
CLPTM1O96005 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CLPTM1O96005 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CLPTM1O96005 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLPTM1O96005 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLPTM1O96005 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
CLPTM1O96005 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLPTM1O96005 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC16.86■□□□□ 0.29
CLPTM1O96005 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC16.86■□□□□ 0.29
CLPTM1O96005 USP36-216ENST00000589424 970 ntTSL 5 BASIC16.86■□□□□ 0.29
CLPTM1O96005 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC16.86■□□□□ 0.29
CLPTM1O96005 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC16.86■□□□□ 0.29
CLPTM1O96005 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CLPTM1O96005 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC16.86■□□□□ 0.29
CLPTM1O96005 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
CLPTM1O96005 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLPTM1O96005 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLPTM1O96005 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.86■□□□□ 0.29
CLPTM1O96005 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CLPTM1O96005 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CLPTM1O96005 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.86■□□□□ 0.29
CLPTM1O96005 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC16.86■□□□□ 0.29
CLPTM1O96005 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
CLPTM1O96005 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CLPTM1O96005 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLPTM1O96005 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLPTM1O96005 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC16.85■□□□□ 0.29
CLPTM1O96005 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.85■□□□□ 0.29
CLPTM1O96005 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.85■□□□□ 0.29
CLPTM1O96005 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
CLPTM1O96005 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CLPTM1O96005 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLPTM1O96005 GOLGA6L3-201ENST00000507199 1679 ntBASIC16.85■□□□□ 0.29
CLPTM1O96005 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CLPTM1O96005 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.85■□□□□ 0.29
CLPTM1O96005 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC16.85■□□□□ 0.29
CLPTM1O96005 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CLPTM1O96005 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC16.85■□□□□ 0.29
CLPTM1O96005 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC16.85■□□□□ 0.29
CLPTM1O96005 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC16.85■□□□□ 0.29
CLPTM1O96005 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CLPTM1O96005 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC16.85■□□□□ 0.29
CLPTM1O96005 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.85■□□□□ 0.29
CLPTM1O96005 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CLPTM1O96005 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CLPTM1O96005 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLPTM1O96005 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLPTM1O96005 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLPTM1O96005 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC16.85■□□□□ 0.29
CLPTM1O96005 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC16.85■□□□□ 0.29
CLPTM1O96005 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CLPTM1O96005 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLPTM1O96005 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CLPTM1O96005 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CLPTM1O96005 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CLPTM1O96005 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CLPTM1O96005 PCDHB17P-201ENST00000539533 2393 ntBASIC16.85■□□□□ 0.29
CLPTM1O96005 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLPTM1O96005 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC16.85■□□□□ 0.29
CLPTM1O96005 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC16.85■□□□□ 0.29
CLPTM1O96005 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLPTM1O96005 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
CLPTM1O96005 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLPTM1O96005 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLPTM1O96005 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms