Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
BEST1O76090 AC104692.2-201ENST00000603054 253 ntBASIC18.69■□□□□ 0.58
BEST1O76090 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC18.69■□□□□ 0.58
BEST1O76090 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.69■□□□□ 0.58
BEST1O76090 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.69■□□□□ 0.58
BEST1O76090 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC18.69■□□□□ 0.58
BEST1O76090 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
BEST1O76090 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
BEST1O76090 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
BEST1O76090 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.69■□□□□ 0.58
BEST1O76090 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
BEST1O76090 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
BEST1O76090 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
BEST1O76090 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.69■□□□□ 0.58
BEST1O76090 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.69■□□□□ 0.58
BEST1O76090 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.69■□□□□ 0.58
BEST1O76090 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BEST1O76090 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.68■□□□□ 0.58
BEST1O76090 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BEST1O76090 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BEST1O76090 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
BEST1O76090 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BEST1O76090 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
BEST1O76090 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
BEST1O76090 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BEST1O76090 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
BEST1O76090 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC18.68■□□□□ 0.58
BEST1O76090 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
BEST1O76090 RBSN-204ENST00000449050 903 ntTSL 2 BASIC18.68■□□□□ 0.58
BEST1O76090 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.68■□□□□ 0.58
BEST1O76090 SAPCD2P3-201ENST00000455031 850 ntBASIC18.68■□□□□ 0.58
BEST1O76090 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.68■□□□□ 0.58
BEST1O76090 AC122714.2-201ENST00000502787 707 ntBASIC18.68■□□□□ 0.58
BEST1O76090 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC18.68■□□□□ 0.58
BEST1O76090 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
BEST1O76090 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
BEST1O76090 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.68■□□□□ 0.58
BEST1O76090 AC116407.2-201ENST00000613639 860 ntBASIC18.68■□□□□ 0.58
BEST1O76090 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.68■□□□□ 0.58
BEST1O76090 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
BEST1O76090 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.68■□□□□ 0.58
BEST1O76090 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
BEST1O76090 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
BEST1O76090 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BEST1O76090 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
BEST1O76090 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BEST1O76090 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
BEST1O76090 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BEST1O76090 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BEST1O76090 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BEST1O76090 AC008764.6-201ENST00000595909 2069 ntBASIC18.67■□□□□ 0.58
BEST1O76090 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BEST1O76090 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.67■□□□□ 0.58
BEST1O76090 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
BEST1O76090 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.67■□□□□ 0.58
BEST1O76090 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.67■□□□□ 0.58
BEST1O76090 DDX43P3-201ENST00000441064 443 ntBASIC18.67■□□□□ 0.58
BEST1O76090 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC18.67■□□□□ 0.58
BEST1O76090 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC18.67■□□□□ 0.58
BEST1O76090 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC18.67■□□□□ 0.58
BEST1O76090 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.67■□□□□ 0.58
BEST1O76090 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.67■□□□□ 0.58
BEST1O76090 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
BEST1O76090 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.67■□□□□ 0.58
BEST1O76090 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BEST1O76090 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
BEST1O76090 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.67■□□□□ 0.58
BEST1O76090 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.67■□□□□ 0.58
BEST1O76090 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.67■□□□□ 0.58
BEST1O76090 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BEST1O76090 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.66■□□□□ 0.58
BEST1O76090 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BEST1O76090 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
BEST1O76090 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.66■□□□□ 0.58
BEST1O76090 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
BEST1O76090 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
BEST1O76090 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
BEST1O76090 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BEST1O76090 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BEST1O76090 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BEST1O76090 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
BEST1O76090 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BEST1O76090 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BEST1O76090 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.66■□□□□ 0.58
BEST1O76090 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
BEST1O76090 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BEST1O76090 ABCD1P5-201ENST00000445663 754 ntBASIC18.66■□□□□ 0.58
BEST1O76090 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
BEST1O76090 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.66■□□□□ 0.58
BEST1O76090 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.66■□□□□ 0.58
BEST1O76090 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.66■□□□□ 0.58
BEST1O76090 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
BEST1O76090 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
BEST1O76090 AC006116.8-202ENST00000587620 1550 ntBASIC18.66■□□□□ 0.58
BEST1O76090 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.66■□□□□ 0.58
BEST1O76090 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
BEST1O76090 REXO1L11P-201ENST00000620964 1927 ntBASIC18.66■□□□□ 0.58
BEST1O76090 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC18.66■□□□□ 0.58
BEST1O76090 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
BEST1O76090 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms