Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
RFPL1O75677 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RFPL1O75677 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RFPL1O75677 NKILA-202ENST00000614771 2598 ntBASIC17.9■□□□□ 0.46
RFPL1O75677 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.9■□□□□ 0.46
RFPL1O75677 AC124067.4-201ENST00000519691 2379 ntBASIC17.9■□□□□ 0.46
RFPL1O75677 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RFPL1O75677 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RFPL1O75677 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.9■□□□□ 0.46
RFPL1O75677 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RFPL1O75677 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.9■□□□□ 0.46
RFPL1O75677 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RFPL1O75677 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RFPL1O75677 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RFPL1O75677 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.9■□□□□ 0.46
RFPL1O75677 PCED1CP-201ENST00000419887 785 ntBASIC17.9■□□□□ 0.46
RFPL1O75677 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.9■□□□□ 0.46
RFPL1O75677 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC17.9■□□□□ 0.46
RFPL1O75677 SEC1P-202ENST00000473944 940 ntBASIC17.9■□□□□ 0.46
RFPL1O75677 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC17.9■□□□□ 0.46
RFPL1O75677 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC17.9■□□□□ 0.46
RFPL1O75677 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RFPL1O75677 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC17.9■□□□□ 0.46
RFPL1O75677 AC140113.3-201ENST00000605663 199 ntBASIC17.9■□□□□ 0.46
RFPL1O75677 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.9■□□□□ 0.46
RFPL1O75677 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.9■□□□□ 0.46
RFPL1O75677 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RFPL1O75677 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RFPL1O75677 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.9■□□□□ 0.46
RFPL1O75677 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.9■□□□□ 0.46
RFPL1O75677 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.89■□□□□ 0.46
RFPL1O75677 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RFPL1O75677 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.89■□□□□ 0.45
RFPL1O75677 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.89■□□□□ 0.45
RFPL1O75677 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.89■□□□□ 0.45
RFPL1O75677 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
RFPL1O75677 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
RFPL1O75677 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC17.89■□□□□ 0.45
RFPL1O75677 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.89■□□□□ 0.45
RFPL1O75677 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.89■□□□□ 0.45
RFPL1O75677 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RFPL1O75677 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.89■□□□□ 0.45
RFPL1O75677 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC17.89■□□□□ 0.45
RFPL1O75677 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
RFPL1O75677 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.89■□□□□ 0.45
RFPL1O75677 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
RFPL1O75677 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RFPL1O75677 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.89■□□□□ 0.45
RFPL1O75677 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RFPL1O75677 AC011676.5-201ENST00000624864 2660 ntBASIC17.89■□□□□ 0.45
RFPL1O75677 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
RFPL1O75677 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
RFPL1O75677 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RFPL1O75677 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RFPL1O75677 IER3-202ENST00000376377 1350 ntBASIC17.89■□□□□ 0.45
RFPL1O75677 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.89■□□□□ 0.45
RFPL1O75677 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.89■□□□□ 0.45
RFPL1O75677 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.89■□□□□ 0.45
RFPL1O75677 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RFPL1O75677 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RFPL1O75677 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.88■□□□□ 0.45
RFPL1O75677 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RFPL1O75677 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RFPL1O75677 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RFPL1O75677 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.88■□□□□ 0.45
RFPL1O75677 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RFPL1O75677 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RFPL1O75677 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RFPL1O75677 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
RFPL1O75677 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RFPL1O75677 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RFPL1O75677 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RFPL1O75677 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC17.88■□□□□ 0.45
RFPL1O75677 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.88■□□□□ 0.45
RFPL1O75677 KRT126P-201ENST00000549467 1181 ntBASIC17.88■□□□□ 0.45
RFPL1O75677 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
RFPL1O75677 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.88■□□□□ 0.45
RFPL1O75677 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RFPL1O75677 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RFPL1O75677 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RFPL1O75677 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
RFPL1O75677 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RFPL1O75677 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RFPL1O75677 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.88■□□□□ 0.45
RFPL1O75677 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
RFPL1O75677 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.88■□□□□ 0.45
RFPL1O75677 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RFPL1O75677 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.88■□□□□ 0.45
RFPL1O75677 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.88■□□□□ 0.45
RFPL1O75677 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RFPL1O75677 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RFPL1O75677 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RFPL1O75677 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RFPL1O75677 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
RFPL1O75677 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RFPL1O75677 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
RFPL1O75677 HLA-J-201ENST00000462773 1622 ntBASIC17.87■□□□□ 0.45
RFPL1O75677 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RFPL1O75677 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.87■□□□□ 0.45
RFPL1O75677 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms