Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
NDUFS3O75489 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
NDUFS3O75489 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
NDUFS3O75489 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
NDUFS3O75489 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NDUFS3O75489 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC17.8■□□□□ 0.44
NDUFS3O75489 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.8■□□□□ 0.44
NDUFS3O75489 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.8■□□□□ 0.44
NDUFS3O75489 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC17.8■□□□□ 0.44
NDUFS3O75489 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NDUFS3O75489 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NDUFS3O75489 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NDUFS3O75489 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.8■□□□□ 0.44
NDUFS3O75489 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NDUFS3O75489 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NDUFS3O75489 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NDUFS3O75489 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NDUFS3O75489 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NDUFS3O75489 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NDUFS3O75489 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.8■□□□□ 0.44
NDUFS3O75489 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
NDUFS3O75489 FZD10-202ENST00000539839 3282 ntBASIC17.8■□□□□ 0.44
NDUFS3O75489 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NDUFS3O75489 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NDUFS3O75489 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NDUFS3O75489 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.79■□□□□ 0.44
NDUFS3O75489 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NDUFS3O75489 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
NDUFS3O75489 LETM1P2-201ENST00000597330 2178 ntBASIC17.79■□□□□ 0.44
NDUFS3O75489 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.79■□□□□ 0.44
NDUFS3O75489 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC17.79■□□□□ 0.44
NDUFS3O75489 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NDUFS3O75489 AL049597.2-201ENST00000565575 961 ntBASIC17.79■□□□□ 0.44
NDUFS3O75489 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.79■□□□□ 0.44
NDUFS3O75489 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.79■□□□□ 0.44
NDUFS3O75489 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NDUFS3O75489 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NDUFS3O75489 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NDUFS3O75489 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NDUFS3O75489 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.79■□□□□ 0.44
NDUFS3O75489 Z83836.1-201ENST00000624605 1642 ntBASIC17.79■□□□□ 0.44
NDUFS3O75489 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NDUFS3O75489 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NDUFS3O75489 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NDUFS3O75489 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NDUFS3O75489 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
NDUFS3O75489 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NDUFS3O75489 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NDUFS3O75489 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NDUFS3O75489 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NDUFS3O75489 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NDUFS3O75489 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NDUFS3O75489 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
NDUFS3O75489 LINC00896-202ENST00000609602 2128 ntBASIC17.78■□□□□ 0.44
NDUFS3O75489 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NDUFS3O75489 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NDUFS3O75489 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.78■□□□□ 0.44
NDUFS3O75489 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.78■□□□□ 0.44
NDUFS3O75489 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.78■□□□□ 0.44
NDUFS3O75489 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.78■□□□□ 0.44
NDUFS3O75489 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NDUFS3O75489 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NDUFS3O75489 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
NDUFS3O75489 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
NDUFS3O75489 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
NDUFS3O75489 SPDYE13P-201ENST00000445314 798 ntBASIC17.78■□□□□ 0.44
NDUFS3O75489 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NDUFS3O75489 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NDUFS3O75489 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NDUFS3O75489 RNF126P1-202ENST00000569893 925 ntBASIC17.78■□□□□ 0.44
NDUFS3O75489 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC17.78■□□□□ 0.44
NDUFS3O75489 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.78■□□□□ 0.44
NDUFS3O75489 AL390719.2-201ENST00000606993 987 ntBASIC17.78■□□□□ 0.44
NDUFS3O75489 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
NDUFS3O75489 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NDUFS3O75489 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
NDUFS3O75489 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NDUFS3O75489 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
NDUFS3O75489 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.78■□□□□ 0.44
NDUFS3O75489 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
NDUFS3O75489 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.78■□□□□ 0.44
NDUFS3O75489 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NDUFS3O75489 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.78■□□□□ 0.44
NDUFS3O75489 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NDUFS3O75489 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
NDUFS3O75489 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
NDUFS3O75489 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
NDUFS3O75489 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
NDUFS3O75489 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NDUFS3O75489 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
NDUFS3O75489 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NDUFS3O75489 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NDUFS3O75489 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NDUFS3O75489 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.77■□□□□ 0.44
NDUFS3O75489 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.77■□□□□ 0.44
NDUFS3O75489 GUK1-204ENST00000366721 689 ntTSL 3 BASIC17.77■□□□□ 0.44
NDUFS3O75489 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NDUFS3O75489 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
NDUFS3O75489 AL645929.1-201ENST00000420084 975 ntBASIC17.77■□□□□ 0.44
NDUFS3O75489 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms