Protein–RNA interactions for Protein: O75396

SEC22B, Vesicle-trafficking protein SEC22b, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22BO75396 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SEC22BO75396 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.21■□□□□ 0.35
SEC22BO75396 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.21■□□□□ 0.35
SEC22BO75396 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.21■□□□□ 0.35
SEC22BO75396 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.21■□□□□ 0.35
SEC22BO75396 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.21■□□□□ 0.35
SEC22BO75396 AC140113.3-201ENST00000605663 199 ntBASIC17.21■□□□□ 0.35
SEC22BO75396 AC116407.2-201ENST00000613639 860 ntBASIC17.21■□□□□ 0.35
SEC22BO75396 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SEC22BO75396 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
SEC22BO75396 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SEC22BO75396 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.21■□□□□ 0.35
SEC22BO75396 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
SEC22BO75396 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.21■□□□□ 0.35
SEC22BO75396 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.21■□□□□ 0.35
SEC22BO75396 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
SEC22BO75396 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
SEC22BO75396 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
SEC22BO75396 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SEC22BO75396 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SEC22BO75396 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SEC22BO75396 SIRPAP1-201ENST00000448467 1770 ntBASIC17.2■□□□□ 0.34
SEC22BO75396 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SEC22BO75396 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SEC22BO75396 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
SEC22BO75396 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.2■□□□□ 0.34
SEC22BO75396 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
SEC22BO75396 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.2■□□□□ 0.34
SEC22BO75396 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.2■□□□□ 0.34
SEC22BO75396 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SEC22BO75396 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.2■□□□□ 0.34
SEC22BO75396 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.2■□□□□ 0.34
SEC22BO75396 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SEC22BO75396 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
SEC22BO75396 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SEC22BO75396 AC113404.2-201ENST00000507884 177 ntBASIC17.2■□□□□ 0.34
SEC22BO75396 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
SEC22BO75396 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.2■□□□□ 0.34
SEC22BO75396 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.2■□□□□ 0.34
SEC22BO75396 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
SEC22BO75396 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
SEC22BO75396 AC024563.2-201ENST00000603282 481 ntBASIC17.2■□□□□ 0.34
SEC22BO75396 AC145285.6-201ENST00000604632 637 ntBASIC17.2■□□□□ 0.34
SEC22BO75396 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.2■□□□□ 0.34
SEC22BO75396 AL138966.2-201ENST00000621997 464 ntBASIC17.2■□□□□ 0.34
SEC22BO75396 AL023973.1-201ENST00000624619 620 ntBASIC17.2■□□□□ 0.34
SEC22BO75396 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SEC22BO75396 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SEC22BO75396 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SEC22BO75396 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.2■□□□□ 0.34
SEC22BO75396 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.2■□□□□ 0.34
SEC22BO75396 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.2■□□□□ 0.34
SEC22BO75396 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
SEC22BO75396 AC012313.1-201ENST00000593393 3059 ntBASIC17.19■□□□□ 0.34
SEC22BO75396 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SEC22BO75396 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.19■□□□□ 0.34
SEC22BO75396 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
SEC22BO75396 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SEC22BO75396 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SEC22BO75396 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.19■□□□□ 0.34
SEC22BO75396 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
SEC22BO75396 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SEC22BO75396 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SEC22BO75396 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
SEC22BO75396 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SEC22BO75396 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SEC22BO75396 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SEC22BO75396 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SEC22BO75396 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.19■□□□□ 0.34
SEC22BO75396 LIN28AP1-201ENST00000429574 405 ntBASIC17.19■□□□□ 0.34
SEC22BO75396 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SEC22BO75396 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
SEC22BO75396 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.19■□□□□ 0.34
SEC22BO75396 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.19■□□□□ 0.34
SEC22BO75396 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.19■□□□□ 0.34
SEC22BO75396 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SEC22BO75396 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.19■□□□□ 0.34
SEC22BO75396 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SEC22BO75396 AC133963.1-201ENST00000504166 1679 ntBASIC17.19■□□□□ 0.34
SEC22BO75396 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SEC22BO75396 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SEC22BO75396 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SEC22BO75396 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
SEC22BO75396 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
SEC22BO75396 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SEC22BO75396 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SEC22BO75396 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
SEC22BO75396 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SEC22BO75396 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SEC22BO75396 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SEC22BO75396 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.18■□□□□ 0.34
SEC22BO75396 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.18■□□□□ 0.34
SEC22BO75396 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SEC22BO75396 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SEC22BO75396 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
SEC22BO75396 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
SEC22BO75396 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SEC22BO75396 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SEC22BO75396 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.18■□□□□ 0.34
SEC22BO75396 AC087499.1-201ENST00000418141 1075 ntBASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms