Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.93■□□□□ 0.3
SCN2BO60939 DUT-205ENST00000558813 769 ntTSL 2 BASIC16.93■□□□□ 0.3
SCN2BO60939 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC16.93■□□□□ 0.3
SCN2BO60939 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC16.93■□□□□ 0.3
SCN2BO60939 AC145285.6-201ENST00000604632 637 ntBASIC16.93■□□□□ 0.3
SCN2BO60939 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
SCN2BO60939 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC16.93■□□□□ 0.3
SCN2BO60939 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC16.93■□□□□ 0.3
SCN2BO60939 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SCN2BO60939 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SCN2BO60939 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
SCN2BO60939 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.93■□□□□ 0.3
SCN2BO60939 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SCN2BO60939 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.93■□□□□ 0.3
SCN2BO60939 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SCN2BO60939 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
SCN2BO60939 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SCN2BO60939 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
SCN2BO60939 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SCN2BO60939 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SCN2BO60939 AC009949.1-201ENST00000623048 1830 ntBASIC16.92■□□□□ 0.3
SCN2BO60939 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SCN2BO60939 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC16.92■□□□□ 0.3
SCN2BO60939 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.92■□□□□ 0.3
SCN2BO60939 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC16.92■□□□□ 0.3
SCN2BO60939 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.92■□□□□ 0.3
SCN2BO60939 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.92■□□□□ 0.3
SCN2BO60939 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
SCN2BO60939 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.92■□□□□ 0.3
SCN2BO60939 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SCN2BO60939 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SCN2BO60939 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
SCN2BO60939 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
SCN2BO60939 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.92■□□□□ 0.3
SCN2BO60939 AL023806.1-201ENST00000603994 1649 ntBASIC16.92■□□□□ 0.3
SCN2BO60939 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SCN2BO60939 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SCN2BO60939 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SCN2BO60939 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SCN2BO60939 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SCN2BO60939 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SCN2BO60939 KRT8P47-201ENST00000604727 1398 ntBASIC16.91■□□□□ 0.3
SCN2BO60939 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SCN2BO60939 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SCN2BO60939 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.91■□□□□ 0.3
SCN2BO60939 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
SCN2BO60939 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.91■□□□□ 0.3
SCN2BO60939 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
SCN2BO60939 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
SCN2BO60939 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
SCN2BO60939 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SCN2BO60939 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC16.91■□□□□ 0.3
SCN2BO60939 CD70-202ENST00000423145 881 ntTSL 2 BASIC16.91■□□□□ 0.3
SCN2BO60939 KRT18P65-201ENST00000439811 1286 ntBASIC16.91■□□□□ 0.3
SCN2BO60939 AC024563.2-201ENST00000603282 481 ntBASIC16.91■□□□□ 0.3
SCN2BO60939 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.91■□□□□ 0.3
SCN2BO60939 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
SCN2BO60939 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.91■□□□□ 0.3
SCN2BO60939 HLA-J-201ENST00000462773 1622 ntBASIC16.91■□□□□ 0.3
SCN2BO60939 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SCN2BO60939 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.91■□□□□ 0.3
SCN2BO60939 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SCN2BO60939 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SCN2BO60939 AP001094.4-201ENST00000579008 2176 ntBASIC16.91■□□□□ 0.3
SCN2BO60939 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SCN2BO60939 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.91■□□□□ 0.3
SCN2BO60939 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.91■□□□□ 0.3
SCN2BO60939 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SCN2BO60939 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.9■□□□□ 0.3
SCN2BO60939 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.9■□□□□ 0.3
SCN2BO60939 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SCN2BO60939 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
SCN2BO60939 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SCN2BO60939 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SCN2BO60939 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.9■□□□□ 0.3
SCN2BO60939 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
SCN2BO60939 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SCN2BO60939 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SCN2BO60939 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SCN2BO60939 AC012313.1-201ENST00000593393 3059 ntBASIC16.9■□□□□ 0.3
SCN2BO60939 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
SCN2BO60939 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SCN2BO60939 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.9■□□□□ 0.3
SCN2BO60939 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
SCN2BO60939 AC087499.1-201ENST00000418141 1075 ntBASIC16.9■□□□□ 0.3
SCN2BO60939 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SCN2BO60939 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SCN2BO60939 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC16.9■□□□□ 0.3
SCN2BO60939 RASA4DP-201ENST00000460726 1199 ntBASIC16.9■□□□□ 0.3
SCN2BO60939 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SCN2BO60939 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
SCN2BO60939 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.9■□□□□ 0.3
SCN2BO60939 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SCN2BO60939 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.9■□□□□ 0.3
SCN2BO60939 AL391807.1-203ENST00000604392 2365 ntBASIC16.9■□□□□ 0.3
SCN2BO60939 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SCN2BO60939 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SCN2BO60939 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
SCN2BO60939 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SCN2BO60939 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms