Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PFDN1O60925 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC15.93■□□□□ 0.14
PFDN1O60925 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PFDN1O60925 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PFDN1O60925 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PFDN1O60925 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
PFDN1O60925 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PFDN1O60925 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
PFDN1O60925 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC15.93■□□□□ 0.14
PFDN1O60925 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PFDN1O60925 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PFDN1O60925 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC15.93■□□□□ 0.14
PFDN1O60925 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PFDN1O60925 SYT6-210ENST00000641643 1587 ntBASIC15.93■□□□□ 0.14
PFDN1O60925 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PFDN1O60925 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.93■□□□□ 0.14
PFDN1O60925 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
PFDN1O60925 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PFDN1O60925 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC15.93■□□□□ 0.14
PFDN1O60925 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC15.93■□□□□ 0.14
PFDN1O60925 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC15.93■□□□□ 0.14
PFDN1O60925 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC15.93■□□□□ 0.14
PFDN1O60925 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PFDN1O60925 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
PFDN1O60925 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC15.93■□□□□ 0.14
PFDN1O60925 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PFDN1O60925 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PFDN1O60925 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PFDN1O60925 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
PFDN1O60925 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC15.93■□□□□ 0.14
PFDN1O60925 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC15.93■□□□□ 0.14
PFDN1O60925 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PFDN1O60925 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PFDN1O60925 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PFDN1O60925 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC15.93■□□□□ 0.14
PFDN1O60925 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PFDN1O60925 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.93■□□□□ 0.14
PFDN1O60925 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PFDN1O60925 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PFDN1O60925 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
PFDN1O60925 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
PFDN1O60925 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC15.92■□□□□ 0.14
PFDN1O60925 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC15.92■□□□□ 0.14
PFDN1O60925 TNRC18P2-201ENST00000417666 2714 ntBASIC15.92■□□□□ 0.14
PFDN1O60925 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PFDN1O60925 GOLGA6L5P-202ENST00000515341 1828 ntBASIC15.92■□□□□ 0.14
PFDN1O60925 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PFDN1O60925 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC15.92■□□□□ 0.14
PFDN1O60925 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC15.92■□□□□ 0.14
PFDN1O60925 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC15.92■□□□□ 0.14
PFDN1O60925 AL033527.3-201ENST00000566366 1196 ntBASIC15.92■□□□□ 0.14
PFDN1O60925 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC15.92■□□□□ 0.14
PFDN1O60925 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
PFDN1O60925 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.92■□□□□ 0.14
PFDN1O60925 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
PFDN1O60925 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
PFDN1O60925 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PFDN1O60925 PTENP1-202ENST00000532280 3996 ntBASIC15.92■□□□□ 0.14
PFDN1O60925 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PFDN1O60925 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PFDN1O60925 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
PFDN1O60925 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PFDN1O60925 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PFDN1O60925 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PFDN1O60925 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC15.92■□□□□ 0.14
PFDN1O60925 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PFDN1O60925 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
PFDN1O60925 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PFDN1O60925 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC15.92■□□□□ 0.14
PFDN1O60925 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PFDN1O60925 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PFDN1O60925 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PFDN1O60925 AL365203.3-201ENST00000609742 2057 ntBASIC15.91■□□□□ 0.14
PFDN1O60925 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC15.91■□□□□ 0.14
PFDN1O60925 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.91■□□□□ 0.14
PFDN1O60925 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC15.91■□□□□ 0.14
PFDN1O60925 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PFDN1O60925 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PFDN1O60925 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC15.91■□□□□ 0.14
PFDN1O60925 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC15.91■□□□□ 0.14
PFDN1O60925 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
PFDN1O60925 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PFDN1O60925 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PFDN1O60925 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.91■□□□□ 0.14
PFDN1O60925 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PFDN1O60925 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PFDN1O60925 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
PFDN1O60925 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC15.91■□□□□ 0.14
PFDN1O60925 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC15.91■□□□□ 0.14
PFDN1O60925 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PFDN1O60925 AC053503.5-201ENST00000601508 636 ntBASIC15.91■□□□□ 0.14
PFDN1O60925 AL031963.3-201ENST00000606441 850 ntBASIC15.91■□□□□ 0.14
PFDN1O60925 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.91■□□□□ 0.14
PFDN1O60925 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PFDN1O60925 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PFDN1O60925 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC15.91■□□□□ 0.14
PFDN1O60925 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
PFDN1O60925 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PFDN1O60925 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
PFDN1O60925 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms