Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.57■□□□□ 0.4
TRIM13O60858 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.57■□□□□ 0.4
TRIM13O60858 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
TRIM13O60858 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM13O60858 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
TRIM13O60858 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM13O60858 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM13O60858 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM13O60858 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
TRIM13O60858 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
TRIM13O60858 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
TRIM13O60858 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM13O60858 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.57■□□□□ 0.4
TRIM13O60858 REXO1L11P-201ENST00000620964 1927 ntBASIC17.57■□□□□ 0.4
TRIM13O60858 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.56■□□□□ 0.4
TRIM13O60858 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM13O60858 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM13O60858 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM13O60858 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.56■□□□□ 0.4
TRIM13O60858 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.56■□□□□ 0.4
TRIM13O60858 AC009949.1-201ENST00000623048 1830 ntBASIC17.56■□□□□ 0.4
TRIM13O60858 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM13O60858 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
TRIM13O60858 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
TRIM13O60858 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM13O60858 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM13O60858 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM13O60858 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.56■□□□□ 0.4
TRIM13O60858 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM13O60858 TSPY14P-201ENST00000303979 915 ntBASIC17.56■□□□□ 0.4
TRIM13O60858 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.56■□□□□ 0.4
TRIM13O60858 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM13O60858 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM13O60858 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM13O60858 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.56■□□□□ 0.4
TRIM13O60858 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM13O60858 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.56■□□□□ 0.4
TRIM13O60858 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM13O60858 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM13O60858 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
TRIM13O60858 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.56■□□□□ 0.4
TRIM13O60858 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM13O60858 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
TRIM13O60858 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM13O60858 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.56■□□□□ 0.4
TRIM13O60858 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM13O60858 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.56■□□□□ 0.4
TRIM13O60858 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM13O60858 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM13O60858 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM13O60858 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.55■□□□□ 0.4
TRIM13O60858 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM13O60858 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM13O60858 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
TRIM13O60858 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.55■□□□□ 0.4
TRIM13O60858 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM13O60858 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
TRIM13O60858 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM13O60858 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM13O60858 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM13O60858 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM13O60858 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
TRIM13O60858 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM13O60858 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM13O60858 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.55■□□□□ 0.4
TRIM13O60858 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM13O60858 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM13O60858 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.55■□□□□ 0.4
TRIM13O60858 MIR1238-201ENST00000408483 83 ntBASIC17.55■□□□□ 0.4
TRIM13O60858 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.55■□□□□ 0.4
TRIM13O60858 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
TRIM13O60858 DENND3-207ENST00000518347 850 ntTSL 2 BASIC17.55■□□□□ 0.4
TRIM13O60858 MIR3917-201ENST00000580971 93 ntBASIC17.55■□□□□ 0.4
TRIM13O60858 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.55■□□□□ 0.4
TRIM13O60858 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM13O60858 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM13O60858 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.55■□□□□ 0.4
TRIM13O60858 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM13O60858 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
TRIM13O60858 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM13O60858 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM13O60858 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM13O60858 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM13O60858 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
TRIM13O60858 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
TRIM13O60858 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
TRIM13O60858 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
TRIM13O60858 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM13O60858 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM13O60858 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM13O60858 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM13O60858 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.54■□□□□ 0.4
TRIM13O60858 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM13O60858 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM13O60858 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM13O60858 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM13O60858 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
TRIM13O60858 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
TRIM13O60858 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.54■□□□□ 0.4
TRIM13O60858 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms