Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TSPAN3O60637 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
TSPAN3O60637 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TSPAN3O60637 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.37■□□□□ 0.53
TSPAN3O60637 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TSPAN3O60637 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.37■□□□□ 0.53
TSPAN3O60637 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TSPAN3O60637 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TSPAN3O60637 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TSPAN3O60637 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
TSPAN3O60637 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TSPAN3O60637 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TSPAN3O60637 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TSPAN3O60637 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TSPAN3O60637 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TSPAN3O60637 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TSPAN3O60637 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TSPAN3O60637 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TSPAN3O60637 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TSPAN3O60637 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TSPAN3O60637 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TSPAN3O60637 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TSPAN3O60637 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
TSPAN3O60637 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TSPAN3O60637 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.36■□□□□ 0.53
TSPAN3O60637 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.36■□□□□ 0.53
TSPAN3O60637 KRT8P10-201ENST00000450021 1447 ntBASIC18.36■□□□□ 0.53
TSPAN3O60637 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
TSPAN3O60637 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TSPAN3O60637 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.36■□□□□ 0.53
TSPAN3O60637 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC18.36■□□□□ 0.53
TSPAN3O60637 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TSPAN3O60637 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.36■□□□□ 0.53
TSPAN3O60637 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.36■□□□□ 0.53
TSPAN3O60637 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.36■□□□□ 0.53
TSPAN3O60637 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
TSPAN3O60637 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TSPAN3O60637 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TSPAN3O60637 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TSPAN3O60637 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
TSPAN3O60637 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TSPAN3O60637 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.35■□□□□ 0.53
TSPAN3O60637 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TSPAN3O60637 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TSPAN3O60637 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TSPAN3O60637 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.35■□□□□ 0.53
TSPAN3O60637 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.35■□□□□ 0.53
TSPAN3O60637 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.35■□□□□ 0.53
TSPAN3O60637 AC010460.3-201ENST00000511359 1579 ntBASIC18.35■□□□□ 0.53
TSPAN3O60637 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TSPAN3O60637 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TSPAN3O60637 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
TSPAN3O60637 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
TSPAN3O60637 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
TSPAN3O60637 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TSPAN3O60637 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC18.35■□□□□ 0.53
TSPAN3O60637 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC18.35■□□□□ 0.53
TSPAN3O60637 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.35■□□□□ 0.53
TSPAN3O60637 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TSPAN3O60637 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TSPAN3O60637 AL160237.2-201ENST00000556165 472 ntBASIC18.35■□□□□ 0.53
TSPAN3O60637 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.35■□□□□ 0.53
TSPAN3O60637 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.35■□□□□ 0.53
TSPAN3O60637 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.35■□□□□ 0.53
TSPAN3O60637 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.35■□□□□ 0.53
TSPAN3O60637 AP001269.4-201ENST00000609611 512 ntBASIC18.35■□□□□ 0.53
TSPAN3O60637 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC18.35■□□□□ 0.53
TSPAN3O60637 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TSPAN3O60637 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TSPAN3O60637 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
TSPAN3O60637 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
TSPAN3O60637 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TSPAN3O60637 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
TSPAN3O60637 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TSPAN3O60637 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TSPAN3O60637 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TSPAN3O60637 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.35■□□□□ 0.53
TSPAN3O60637 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TSPAN3O60637 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
TSPAN3O60637 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TSPAN3O60637 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
TSPAN3O60637 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
TSPAN3O60637 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
TSPAN3O60637 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.34■□□□□ 0.53
TSPAN3O60637 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TSPAN3O60637 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TSPAN3O60637 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TSPAN3O60637 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TSPAN3O60637 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TSPAN3O60637 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TSPAN3O60637 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TSPAN3O60637 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC18.34■□□□□ 0.53
TSPAN3O60637 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TSPAN3O60637 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
TSPAN3O60637 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TSPAN3O60637 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TSPAN3O60637 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TSPAN3O60637 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.34■□□□□ 0.53
TSPAN3O60637 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.34■□□□□ 0.53
TSPAN3O60637 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms