Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LCMT2O60294 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LCMT2O60294 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
LCMT2O60294 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LCMT2O60294 AC096633.1-201ENST00000422446 749 ntBASIC17.05■□□□□ 0.32
LCMT2O60294 IGHV3-47-201ENST00000425060 335 ntBASIC17.05■□□□□ 0.32
LCMT2O60294 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LCMT2O60294 KRT17P6-201ENST00000453795 1220 ntBASIC17.05■□□□□ 0.32
LCMT2O60294 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC17.05■□□□□ 0.32
LCMT2O60294 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.05■□□□□ 0.32
LCMT2O60294 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC17.05■□□□□ 0.32
LCMT2O60294 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC17.05■□□□□ 0.32
LCMT2O60294 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC17.05■□□□□ 0.32
LCMT2O60294 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.05■□□□□ 0.32
LCMT2O60294 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.05■□□□□ 0.32
LCMT2O60294 AL138831.2-201ENST00000606564 490 ntBASIC17.05■□□□□ 0.32
LCMT2O60294 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC17.05■□□□□ 0.32
LCMT2O60294 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
LCMT2O60294 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LCMT2O60294 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LCMT2O60294 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LCMT2O60294 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LCMT2O60294 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.05■□□□□ 0.32
LCMT2O60294 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LCMT2O60294 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.05■□□□□ 0.32
LCMT2O60294 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
LCMT2O60294 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LCMT2O60294 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
LCMT2O60294 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
LCMT2O60294 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LCMT2O60294 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LCMT2O60294 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.05■□□□□ 0.32
LCMT2O60294 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
LCMT2O60294 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LCMT2O60294 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LCMT2O60294 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
LCMT2O60294 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LCMT2O60294 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.04■□□□□ 0.32
LCMT2O60294 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LCMT2O60294 AC010460.3-201ENST00000511359 1579 ntBASIC17.04■□□□□ 0.32
LCMT2O60294 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.04■□□□□ 0.32
LCMT2O60294 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LCMT2O60294 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.04■□□□□ 0.32
LCMT2O60294 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.04■□□□□ 0.32
LCMT2O60294 Z69720.1-201ENST00000601483 472 ntBASIC17.04■□□□□ 0.32
LCMT2O60294 AC116407.2-201ENST00000613639 860 ntBASIC17.04■□□□□ 0.32
LCMT2O60294 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LCMT2O60294 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.04■□□□□ 0.32
LCMT2O60294 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
LCMT2O60294 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LCMT2O60294 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.04■□□□□ 0.32
LCMT2O60294 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LCMT2O60294 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LCMT2O60294 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LCMT2O60294 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LCMT2O60294 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LCMT2O60294 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.04■□□□□ 0.32
LCMT2O60294 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.04■□□□□ 0.32
LCMT2O60294 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
LCMT2O60294 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LCMT2O60294 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LCMT2O60294 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LCMT2O60294 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
LCMT2O60294 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.03■□□□□ 0.32
LCMT2O60294 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.03■□□□□ 0.32
LCMT2O60294 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
LCMT2O60294 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LCMT2O60294 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LCMT2O60294 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LCMT2O60294 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
LCMT2O60294 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
LCMT2O60294 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
LCMT2O60294 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
LCMT2O60294 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LCMT2O60294 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
LCMT2O60294 VENTXP7-201ENST00000475503 772 ntBASIC17.03■□□□□ 0.32
LCMT2O60294 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.03■□□□□ 0.32
LCMT2O60294 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.03■□□□□ 0.32
LCMT2O60294 AC074051.2-201ENST00000565115 352 ntBASIC17.03■□□□□ 0.32
LCMT2O60294 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.03■□□□□ 0.32
LCMT2O60294 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.03■□□□□ 0.32
LCMT2O60294 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
LCMT2O60294 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
LCMT2O60294 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
LCMT2O60294 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LCMT2O60294 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
LCMT2O60294 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LCMT2O60294 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LCMT2O60294 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LCMT2O60294 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LCMT2O60294 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.03■□□□□ 0.32
LCMT2O60294 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LCMT2O60294 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
LCMT2O60294 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
LCMT2O60294 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
LCMT2O60294 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.02■□□□□ 0.32
LCMT2O60294 NSUN5P1-202ENST00000421140 1535 ntBASIC17.02■□□□□ 0.32
LCMT2O60294 NSUN5P2-203ENST00000457352 1529 ntBASIC17.02■□□□□ 0.32
LCMT2O60294 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
LCMT2O60294 AC005332.8-201ENST00000622750 2735 ntBASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms