Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PCDH7O60245 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.05■□□□□ 0.32
PCDH7O60245 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDH7O60245 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDH7O60245 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDH7O60245 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
PCDH7O60245 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDH7O60245 KRT8P47-201ENST00000604727 1398 ntBASIC17.04■□□□□ 0.32
PCDH7O60245 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PCDH7O60245 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDH7O60245 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDH7O60245 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDH7O60245 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
PCDH7O60245 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDH7O60245 MIR662-201ENST00000384847 95 ntBASIC17.04■□□□□ 0.32
PCDH7O60245 IGHGP-201ENST00000390555 1178 ntBASIC17.04■□□□□ 0.32
PCDH7O60245 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDH7O60245 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.04■□□□□ 0.32
PCDH7O60245 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.04■□□□□ 0.32
PCDH7O60245 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.04■□□□□ 0.32
PCDH7O60245 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PCDH7O60245 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.04■□□□□ 0.32
PCDH7O60245 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC17.04■□□□□ 0.32
PCDH7O60245 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.04■□□□□ 0.32
PCDH7O60245 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.04■□□□□ 0.32
PCDH7O60245 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.04■□□□□ 0.32
PCDH7O60245 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.04■□□□□ 0.32
PCDH7O60245 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.04■□□□□ 0.32
PCDH7O60245 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.04■□□□□ 0.32
PCDH7O60245 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.04■□□□□ 0.32
PCDH7O60245 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PCDH7O60245 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDH7O60245 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PCDH7O60245 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.04■□□□□ 0.32
PCDH7O60245 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.04■□□□□ 0.32
PCDH7O60245 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PCDH7O60245 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
PCDH7O60245 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.04■□□□□ 0.32
PCDH7O60245 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
PCDH7O60245 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
PCDH7O60245 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
PCDH7O60245 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDH7O60245 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDH7O60245 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDH7O60245 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.04■□□□□ 0.32
PCDH7O60245 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.03■□□□□ 0.32
PCDH7O60245 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDH7O60245 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.03■□□□□ 0.32
PCDH7O60245 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDH7O60245 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.03■□□□□ 0.32
PCDH7O60245 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDH7O60245 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.03■□□□□ 0.32
PCDH7O60245 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.03■□□□□ 0.32
PCDH7O60245 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.03■□□□□ 0.32
PCDH7O60245 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.03■□□□□ 0.32
PCDH7O60245 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDH7O60245 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCDH7O60245 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.03■□□□□ 0.32
PCDH7O60245 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.03■□□□□ 0.32
PCDH7O60245 VENTXP5-201ENST00000523979 775 ntBASIC17.03■□□□□ 0.32
PCDH7O60245 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.03■□□□□ 0.32
PCDH7O60245 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.03■□□□□ 0.32
PCDH7O60245 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.03■□□□□ 0.32
PCDH7O60245 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCDH7O60245 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.03■□□□□ 0.32
PCDH7O60245 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
PCDH7O60245 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCDH7O60245 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDH7O60245 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDH7O60245 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.03■□□□□ 0.32
PCDH7O60245 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCDH7O60245 LINC01311-201ENST00000565162 1445 ntBASIC17.03■□□□□ 0.32
PCDH7O60245 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.03■□□□□ 0.32
PCDH7O60245 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCDH7O60245 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCDH7O60245 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
PCDH7O60245 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDH7O60245 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDH7O60245 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.02■□□□□ 0.32
PCDH7O60245 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
PCDH7O60245 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.02■□□□□ 0.32
PCDH7O60245 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.02■□□□□ 0.32
PCDH7O60245 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDH7O60245 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDH7O60245 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PCDH7O60245 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDH7O60245 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.02■□□□□ 0.32
PCDH7O60245 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PCDH7O60245 AC133963.1-201ENST00000504166 1679 ntBASIC17.02■□□□□ 0.32
PCDH7O60245 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDH7O60245 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.02■□□□□ 0.32
PCDH7O60245 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDH7O60245 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PCDH7O60245 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDH7O60245 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PCDH7O60245 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.02■□□□□ 0.32
PCDH7O60245 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PCDH7O60245 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.02■□□□□ 0.32
PCDH7O60245 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.02■□□□□ 0.32
PCDH7O60245 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms