Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.33■□□□□ 0.69
EXTL3O43909 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
EXTL3O43909 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
EXTL3O43909 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
EXTL3O43909 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
EXTL3O43909 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
EXTL3O43909 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
EXTL3O43909 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
EXTL3O43909 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
EXTL3O43909 COX5BP2-201ENST00000392354 334 ntBASIC19.33■□□□□ 0.68
EXTL3O43909 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC19.33■□□□□ 0.68
EXTL3O43909 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC19.33■□□□□ 0.68
EXTL3O43909 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
EXTL3O43909 NUS1P1-201ENST00000446295 882 ntBASIC19.33■□□□□ 0.68
EXTL3O43909 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
EXTL3O43909 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
EXTL3O43909 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
EXTL3O43909 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC19.33■□□□□ 0.68
EXTL3O43909 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC19.33■□□□□ 0.68
EXTL3O43909 IRF5-214ENST00000613821 595 ntTSL 5 BASIC19.33■□□□□ 0.68
EXTL3O43909 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC19.33■□□□□ 0.68
EXTL3O43909 AL691432.3-201ENST00000621860 400 ntBASIC19.33■□□□□ 0.68
EXTL3O43909 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC19.33■□□□□ 0.68
EXTL3O43909 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC19.33■□□□□ 0.68
EXTL3O43909 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC19.33■□□□□ 0.68
EXTL3O43909 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
EXTL3O43909 TP73-AS1-210ENST00000637775 1455 ntBASIC19.33■□□□□ 0.68
EXTL3O43909 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC19.33■□□□□ 0.68
EXTL3O43909 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
EXTL3O43909 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC19.33■□□□□ 0.68
EXTL3O43909 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
EXTL3O43909 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
EXTL3O43909 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.32■□□□□ 0.68
EXTL3O43909 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC19.32■□□□□ 0.68
EXTL3O43909 AC068880.1-201ENST00000507289 2297 ntBASIC19.32■□□□□ 0.68
EXTL3O43909 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
EXTL3O43909 BX276092.7-203ENST00000637198 1536 ntBASIC19.32■□□□□ 0.68
EXTL3O43909 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
EXTL3O43909 POM121L3P-201ENST00000419331 1163 ntBASIC19.32■□□□□ 0.68
EXTL3O43909 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
EXTL3O43909 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
EXTL3O43909 AC011467.2-201ENST00000598425 242 ntBASIC19.32■□□□□ 0.68
EXTL3O43909 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
EXTL3O43909 CCNC-219ENST00000627680 896 ntTSL 5 BASIC19.32■□□□□ 0.68
EXTL3O43909 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC19.32■□□□□ 0.68
EXTL3O43909 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
EXTL3O43909 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC19.32■□□□□ 0.68
EXTL3O43909 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
EXTL3O43909 ADM-208ENST00000534464 1640 ntTSL 2 BASIC19.32■□□□□ 0.68
EXTL3O43909 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
EXTL3O43909 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC19.31■□□□□ 0.68
EXTL3O43909 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC19.31■□□□□ 0.68
EXTL3O43909 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
EXTL3O43909 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC19.31■□□□□ 0.68
EXTL3O43909 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
EXTL3O43909 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC19.31■□□□□ 0.68
EXTL3O43909 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
EXTL3O43909 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
EXTL3O43909 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
EXTL3O43909 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC19.31■□□□□ 0.68
EXTL3O43909 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC19.31■□□□□ 0.68
EXTL3O43909 PON3-205ENST00000451904 1053 ntTSL 3 BASIC19.31■□□□□ 0.68
EXTL3O43909 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
EXTL3O43909 AC096582.2-201ENST00000510860 516 ntBASIC19.31■□□□□ 0.68
EXTL3O43909 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC19.31■□□□□ 0.68
EXTL3O43909 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC19.31■□□□□ 0.68
EXTL3O43909 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC19.31■□□□□ 0.68
EXTL3O43909 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
EXTL3O43909 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
EXTL3O43909 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
EXTL3O43909 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
EXTL3O43909 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
EXTL3O43909 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
EXTL3O43909 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
EXTL3O43909 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
EXTL3O43909 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
EXTL3O43909 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.31■□□□□ 0.68
EXTL3O43909 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC19.31■□□□□ 0.68
EXTL3O43909 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
EXTL3O43909 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
EXTL3O43909 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.3■□□□□ 0.68
EXTL3O43909 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
EXTL3O43909 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
EXTL3O43909 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
EXTL3O43909 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC19.3■□□□□ 0.68
EXTL3O43909 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
EXTL3O43909 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
EXTL3O43909 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
EXTL3O43909 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
EXTL3O43909 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
EXTL3O43909 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
EXTL3O43909 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
EXTL3O43909 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
EXTL3O43909 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
EXTL3O43909 FAM220CP-201ENST00000395253 831 ntBASIC19.3■□□□□ 0.68
EXTL3O43909 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC19.3■□□□□ 0.68
EXTL3O43909 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC19.3■□□□□ 0.68
EXTL3O43909 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC19.3■□□□□ 0.68
EXTL3O43909 AC114341.1-201ENST00000618070 349 ntBASIC19.3■□□□□ 0.68
EXTL3O43909 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms