Protein–RNA interactions for Protein: O43638

FOXS1, Forkhead box protein S1, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXS1O43638 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.75■□□□□ 0.27
FOXS1O43638 AC106795.1-205ENST00000512851 1056 ntBASIC16.75■□□□□ 0.27
FOXS1O43638 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
FOXS1O43638 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
FOXS1O43638 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16.75■□□□□ 0.27
FOXS1O43638 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.75■□□□□ 0.27
FOXS1O43638 AL031008.1-201ENST00000619963 541 ntBASIC16.75■□□□□ 0.27
FOXS1O43638 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
FOXS1O43638 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
FOXS1O43638 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
FOXS1O43638 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
FOXS1O43638 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
FOXS1O43638 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
FOXS1O43638 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
FOXS1O43638 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
FOXS1O43638 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.75■□□□□ 0.27
FOXS1O43638 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
FOXS1O43638 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.75■□□□□ 0.27
FOXS1O43638 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC16.75■□□□□ 0.27
FOXS1O43638 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.75■□□□□ 0.27
FOXS1O43638 BX276092.7-203ENST00000637198 1536 ntBASIC16.75■□□□□ 0.27
FOXS1O43638 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.75■□□□□ 0.27
FOXS1O43638 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
FOXS1O43638 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
FOXS1O43638 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
FOXS1O43638 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
FOXS1O43638 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
FOXS1O43638 SIRPAP1-201ENST00000448467 1770 ntBASIC16.74■□□□□ 0.27
FOXS1O43638 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
FOXS1O43638 AP005117.1-201ENST00000584346 1413 ntBASIC16.74■□□□□ 0.27
FOXS1O43638 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
FOXS1O43638 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
FOXS1O43638 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
FOXS1O43638 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
FOXS1O43638 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.74■□□□□ 0.27
FOXS1O43638 AL121912.1-201ENST00000603683 238 ntBASIC16.74■□□□□ 0.27
FOXS1O43638 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
FOXS1O43638 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.74■□□□□ 0.27
FOXS1O43638 AP000867.4-201ENST00000641616 219 ntBASIC16.74■□□□□ 0.27
FOXS1O43638 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
FOXS1O43638 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
FOXS1O43638 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
FOXS1O43638 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
FOXS1O43638 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.74■□□□□ 0.27
FOXS1O43638 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.74■□□□□ 0.27
FOXS1O43638 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
FOXS1O43638 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.74■□□□□ 0.27
FOXS1O43638 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
FOXS1O43638 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
FOXS1O43638 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
FOXS1O43638 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
FOXS1O43638 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
FOXS1O43638 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
FOXS1O43638 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
FOXS1O43638 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC16.73■□□□□ 0.27
FOXS1O43638 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
FOXS1O43638 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
FOXS1O43638 MCC-208ENST00000514701 2855 ntTSL 2 BASIC16.73■□□□□ 0.27
FOXS1O43638 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
FOXS1O43638 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
FOXS1O43638 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
FOXS1O43638 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
FOXS1O43638 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
FOXS1O43638 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
FOXS1O43638 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
FOXS1O43638 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
FOXS1O43638 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
FOXS1O43638 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
FOXS1O43638 SLC25A6P5-201ENST00000435663 894 ntBASIC16.73■□□□□ 0.27
FOXS1O43638 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
FOXS1O43638 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC16.73■□□□□ 0.27
FOXS1O43638 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC16.73■□□□□ 0.27
FOXS1O43638 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC16.73■□□□□ 0.27
FOXS1O43638 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
FOXS1O43638 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.73■□□□□ 0.27
FOXS1O43638 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.73■□□□□ 0.27
FOXS1O43638 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
FOXS1O43638 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.73■□□□□ 0.27
FOXS1O43638 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.73■□□□□ 0.27
FOXS1O43638 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.73■□□□□ 0.27
FOXS1O43638 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
FOXS1O43638 AD001527.2-201ENST00000622994 785 ntBASIC16.73■□□□□ 0.27
FOXS1O43638 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
FOXS1O43638 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.73■□□□□ 0.27
FOXS1O43638 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
FOXS1O43638 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.73■□□□□ 0.27
FOXS1O43638 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.73■□□□□ 0.27
FOXS1O43638 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
FOXS1O43638 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
FOXS1O43638 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.73■□□□□ 0.27
FOXS1O43638 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.73■□□□□ 0.27
FOXS1O43638 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
FOXS1O43638 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
FOXS1O43638 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
FOXS1O43638 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
FOXS1O43638 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
FOXS1O43638 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.73■□□□□ 0.27
FOXS1O43638 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.73■□□□□ 0.27
FOXS1O43638 AL049757.1-201ENST00000616842 1596 ntBASIC16.72■□□□□ 0.27
FOXS1O43638 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms