Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
UBFD1O14562 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.3■□□□□ 0.36
UBFD1O14562 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.3■□□□□ 0.36
UBFD1O14562 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
UBFD1O14562 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
UBFD1O14562 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
UBFD1O14562 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.3■□□□□ 0.36
UBFD1O14562 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
UBFD1O14562 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
UBFD1O14562 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
UBFD1O14562 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
UBFD1O14562 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
UBFD1O14562 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
UBFD1O14562 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
UBFD1O14562 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
UBFD1O14562 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
UBFD1O14562 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
UBFD1O14562 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
UBFD1O14562 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
UBFD1O14562 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
UBFD1O14562 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.29■□□□□ 0.36
UBFD1O14562 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.29■□□□□ 0.36
UBFD1O14562 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.29■□□□□ 0.36
UBFD1O14562 AC034232.1-201ENST00000506026 1064 ntBASIC17.29■□□□□ 0.36
UBFD1O14562 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
UBFD1O14562 AC010203.1-204ENST00000548782 407 ntBASIC17.29■□□□□ 0.36
UBFD1O14562 AL441883.1-201ENST00000566170 1045 ntBASIC17.29■□□□□ 0.36
UBFD1O14562 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.29■□□□□ 0.36
UBFD1O14562 AC145285.6-201ENST00000604632 637 ntBASIC17.29■□□□□ 0.36
UBFD1O14562 AC004263.2-201ENST00000617183 678 ntBASIC17.29■□□□□ 0.36
UBFD1O14562 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
UBFD1O14562 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.29■□□□□ 0.36
UBFD1O14562 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
UBFD1O14562 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.29■□□□□ 0.36
UBFD1O14562 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
UBFD1O14562 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
UBFD1O14562 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC17.29■□□□□ 0.36
UBFD1O14562 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
UBFD1O14562 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
UBFD1O14562 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
UBFD1O14562 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
UBFD1O14562 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
UBFD1O14562 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
UBFD1O14562 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.28■□□□□ 0.36
UBFD1O14562 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
UBFD1O14562 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
UBFD1O14562 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
UBFD1O14562 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.28■□□□□ 0.36
UBFD1O14562 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.28■□□□□ 0.36
UBFD1O14562 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
UBFD1O14562 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
UBFD1O14562 AL136038.4-201ENST00000603606 1261 ntBASIC17.28■□□□□ 0.36
UBFD1O14562 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
UBFD1O14562 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
UBFD1O14562 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
UBFD1O14562 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
UBFD1O14562 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
UBFD1O14562 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.28■□□□□ 0.36
UBFD1O14562 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
UBFD1O14562 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
UBFD1O14562 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
UBFD1O14562 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
UBFD1O14562 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.28■□□□□ 0.36
UBFD1O14562 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
UBFD1O14562 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
UBFD1O14562 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
UBFD1O14562 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
UBFD1O14562 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
UBFD1O14562 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
UBFD1O14562 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.27■□□□□ 0.36
UBFD1O14562 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
UBFD1O14562 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
UBFD1O14562 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
UBFD1O14562 AC087499.1-201ENST00000418141 1075 ntBASIC17.27■□□□□ 0.36
UBFD1O14562 SPDYE15P-201ENST00000424157 909 ntBASIC17.27■□□□□ 0.36
UBFD1O14562 SLC25A3P1-201ENST00000443844 931 ntBASIC17.27■□□□□ 0.36
UBFD1O14562 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.27■□□□□ 0.36
UBFD1O14562 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.27■□□□□ 0.36
UBFD1O14562 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
UBFD1O14562 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
UBFD1O14562 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
UBFD1O14562 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
UBFD1O14562 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.35
UBFD1O14562 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
UBFD1O14562 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
UBFD1O14562 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
UBFD1O14562 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.35
UBFD1O14562 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
UBFD1O14562 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.26■□□□□ 0.35
UBFD1O14562 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
UBFD1O14562 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
UBFD1O14562 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
UBFD1O14562 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
UBFD1O14562 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
UBFD1O14562 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
UBFD1O14562 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17.26■□□□□ 0.35
UBFD1O14562 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.26■□□□□ 0.35
UBFD1O14562 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.26■□□□□ 0.35
UBFD1O14562 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
UBFD1O14562 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms