Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PDLIM1O00151 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.02■□□□□ 0.32
PDLIM1O00151 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
PDLIM1O00151 AL355355.2-201ENST00000442321 338 ntBASIC17.02■□□□□ 0.32
PDLIM1O00151 Z85996.1-201ENST00000494644 937 ntBASIC17.02■□□□□ 0.32
PDLIM1O00151 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.02■□□□□ 0.32
PDLIM1O00151 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PDLIM1O00151 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.02■□□□□ 0.32
PDLIM1O00151 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.02■□□□□ 0.32
PDLIM1O00151 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
PDLIM1O00151 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.02■□□□□ 0.32
PDLIM1O00151 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PDLIM1O00151 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.32
PDLIM1O00151 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
PDLIM1O00151 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
PDLIM1O00151 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PDLIM1O00151 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
PDLIM1O00151 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
PDLIM1O00151 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
PDLIM1O00151 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.01■□□□□ 0.31
PDLIM1O00151 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.01■□□□□ 0.31
PDLIM1O00151 PCDHB17P-201ENST00000539533 2393 ntBASIC17.01■□□□□ 0.31
PDLIM1O00151 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC17.01■□□□□ 0.31
PDLIM1O00151 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.01■□□□□ 0.31
PDLIM1O00151 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PDLIM1O00151 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.01■□□□□ 0.31
PDLIM1O00151 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PDLIM1O00151 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PDLIM1O00151 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PDLIM1O00151 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
PDLIM1O00151 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PDLIM1O00151 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.01■□□□□ 0.31
PDLIM1O00151 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PDLIM1O00151 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PDLIM1O00151 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
PDLIM1O00151 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.01■□□□□ 0.31
PDLIM1O00151 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.01■□□□□ 0.31
PDLIM1O00151 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.01■□□□□ 0.31
PDLIM1O00151 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.01■□□□□ 0.31
PDLIM1O00151 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PDLIM1O00151 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.01■□□□□ 0.31
PDLIM1O00151 REXO1L10P-201ENST00000615707 1290 ntBASIC17.01■□□□□ 0.31
PDLIM1O00151 REXO1L12P-201ENST00000622156 912 ntBASIC17.01■□□□□ 0.31
PDLIM1O00151 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PDLIM1O00151 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
PDLIM1O00151 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PDLIM1O00151 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PDLIM1O00151 AL355312.1-201ENST00000407115 2176 ntBASIC17.01■□□□□ 0.31
PDLIM1O00151 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PDLIM1O00151 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.01■□□□□ 0.31
PDLIM1O00151 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PDLIM1O00151 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
PDLIM1O00151 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PDLIM1O00151 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17■□□□□ 0.31
PDLIM1O00151 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PDLIM1O00151 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
PDLIM1O00151 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17■□□□□ 0.31
PDLIM1O00151 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
PDLIM1O00151 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
PDLIM1O00151 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
PDLIM1O00151 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17■□□□□ 0.31
PDLIM1O00151 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17■□□□□ 0.31
PDLIM1O00151 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17■□□□□ 0.31
PDLIM1O00151 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PDLIM1O00151 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
PDLIM1O00151 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
PDLIM1O00151 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
PDLIM1O00151 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PDLIM1O00151 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17■□□□□ 0.31
PDLIM1O00151 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17■□□□□ 0.31
PDLIM1O00151 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17■□□□□ 0.31
PDLIM1O00151 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17■□□□□ 0.31
PDLIM1O00151 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC17■□□□□ 0.31
PDLIM1O00151 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17■□□□□ 0.31
PDLIM1O00151 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
PDLIM1O00151 B3GAT3P1-201ENST00000471720 806 ntBASIC17■□□□□ 0.31
PDLIM1O00151 KRT18P41-201ENST00000518924 1277 ntBASIC17■□□□□ 0.31
PDLIM1O00151 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
PDLIM1O00151 AL355075.4-201ENST00000554988 638 ntBASIC17■□□□□ 0.31
PDLIM1O00151 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17■□□□□ 0.31
PDLIM1O00151 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17■□□□□ 0.31
PDLIM1O00151 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17■□□□□ 0.31
PDLIM1O00151 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17■□□□□ 0.31
PDLIM1O00151 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17■□□□□ 0.31
PDLIM1O00151 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PDLIM1O00151 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PDLIM1O00151 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PDLIM1O00151 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17■□□□□ 0.31
PDLIM1O00151 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17■□□□□ 0.31
PDLIM1O00151 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PDLIM1O00151 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PDLIM1O00151 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17■□□□□ 0.31
PDLIM1O00151 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17■□□□□ 0.31
PDLIM1O00151 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PDLIM1O00151 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PDLIM1O00151 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.99■□□□□ 0.31
PDLIM1O00151 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC16.99■□□□□ 0.31
PDLIM1O00151 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PDLIM1O00151 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
PDLIM1O00151 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms