Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SRRM4A7MD48 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SRRM4A7MD48 AC133963.1-201ENST00000504166 1679 ntBASIC14.37□□□□□ -0.11
SRRM4A7MD48 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
SRRM4A7MD48 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
SRRM4A7MD48 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SRRM4A7MD48 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
SRRM4A7MD48 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SRRM4A7MD48 MIR662-201ENST00000384847 95 ntBASIC14.37□□□□□ -0.11
SRRM4A7MD48 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
SRRM4A7MD48 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC14.37□□□□□ -0.11
SRRM4A7MD48 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SRRM4A7MD48 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SRRM4A7MD48 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SRRM4A7MD48 LINC01023-201ENST00000606054 436 ntBASIC14.37□□□□□ -0.11
SRRM4A7MD48 DFFB-212ENST00000625756 649 ntTSL 5 BASIC14.37□□□□□ -0.11
SRRM4A7MD48 BANP-227ENST00000626016 2144 ntTSL 2 BASIC14.37□□□□□ -0.11
SRRM4A7MD48 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SRRM4A7MD48 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SRRM4A7MD48 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC14.37□□□□□ -0.11
SRRM4A7MD48 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SRRM4A7MD48 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
SRRM4A7MD48 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC14.37□□□□□ -0.11
SRRM4A7MD48 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC14.37□□□□□ -0.11
SRRM4A7MD48 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SRRM4A7MD48 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SRRM4A7MD48 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SRRM4A7MD48 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
SRRM4A7MD48 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
SRRM4A7MD48 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
SRRM4A7MD48 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SRRM4A7MD48 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC14.36□□□□□ -0.11
SRRM4A7MD48 AC012313.1-201ENST00000593393 3059 ntBASIC14.36□□□□□ -0.11
SRRM4A7MD48 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SRRM4A7MD48 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
SRRM4A7MD48 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SRRM4A7MD48 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
SRRM4A7MD48 LINC00304-203ENST00000565008 1864 ntBASIC14.36□□□□□ -0.11
SRRM4A7MD48 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC14.36□□□□□ -0.11
SRRM4A7MD48 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SRRM4A7MD48 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
SRRM4A7MD48 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SRRM4A7MD48 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SRRM4A7MD48 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SRRM4A7MD48 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SRRM4A7MD48 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
SRRM4A7MD48 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SRRM4A7MD48 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SRRM4A7MD48 HBZP1-201ENST00000354915 429 ntBASIC14.36□□□□□ -0.11
SRRM4A7MD48 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SRRM4A7MD48 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
SRRM4A7MD48 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
SRRM4A7MD48 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SRRM4A7MD48 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SRRM4A7MD48 AK4P3-201ENST00000418260 669 ntBASIC14.36□□□□□ -0.11
SRRM4A7MD48 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC14.36□□□□□ -0.11
SRRM4A7MD48 AC104076.2-201ENST00000448912 469 ntBASIC14.36□□□□□ -0.11
SRRM4A7MD48 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SRRM4A7MD48 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC14.36□□□□□ -0.11
SRRM4A7MD48 PPOX-214ENST00000535223 664 ntTSL 3 BASIC14.36□□□□□ -0.11
SRRM4A7MD48 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC14.36□□□□□ -0.11
SRRM4A7MD48 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SRRM4A7MD48 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC14.36□□□□□ -0.11
SRRM4A7MD48 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SRRM4A7MD48 HYMAI.1-201ENST00000620949 238 ntBASIC14.36□□□□□ -0.11
SRRM4A7MD48 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC14.36□□□□□ -0.11
SRRM4A7MD48 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SRRM4A7MD48 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
SRRM4A7MD48 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
SRRM4A7MD48 REXO1L11P-201ENST00000620964 1927 ntBASIC14.36□□□□□ -0.11
SRRM4A7MD48 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
SRRM4A7MD48 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
SRRM4A7MD48 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC14.36□□□□□ -0.11
SRRM4A7MD48 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC14.36□□□□□ -0.11
SRRM4A7MD48 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
SRRM4A7MD48 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
SRRM4A7MD48 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC14.36□□□□□ -0.11
SRRM4A7MD48 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SRRM4A7MD48 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
SRRM4A7MD48 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC14.36□□□□□ -0.11
SRRM4A7MD48 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SRRM4A7MD48 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SRRM4A7MD48 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SRRM4A7MD48 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
SRRM4A7MD48 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SRRM4A7MD48 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
SRRM4A7MD48 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SRRM4A7MD48 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SRRM4A7MD48 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SRRM4A7MD48 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SRRM4A7MD48 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC14.35□□□□□ -0.11
SRRM4A7MD48 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SRRM4A7MD48 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SRRM4A7MD48 IGHGP-201ENST00000390555 1178 ntBASIC14.35□□□□□ -0.11
SRRM4A7MD48 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC14.35□□□□□ -0.11
SRRM4A7MD48 TSPY12P-201ENST00000421279 868 ntBASIC14.35□□□□□ -0.11
SRRM4A7MD48 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC14.35□□□□□ -0.11
SRRM4A7MD48 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC14.35□□□□□ -0.11
SRRM4A7MD48 AC112907.2-201ENST00000448639 330 ntBASIC14.35□□□□□ -0.11
SRRM4A7MD48 HOMER2P1-201ENST00000455653 964 ntBASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms