Protein–RNA interactions for Protein: A0A0B4J1Z2

IGKV1D-43, Immunoglobulin kappa variable 1D-43, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1D-43A0A0B4J1Z2 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
IGKV1D-43A0A0B4J1Z2 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
IGKV1D-43A0A0B4J1Z2 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC15.75■□□□□ 0.11
IGKV1D-43A0A0B4J1Z2 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
IGKV1D-43A0A0B4J1Z2 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
IGKV1D-43A0A0B4J1Z2 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC15.75■□□□□ 0.11
IGKV1D-43A0A0B4J1Z2 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
IGKV1D-43A0A0B4J1Z2 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
IGKV1D-43A0A0B4J1Z2 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
IGKV1D-43A0A0B4J1Z2 BOC-212ENST00000485230 2173 ntTSL 2 BASIC15.75■□□□□ 0.11
IGKV1D-43A0A0B4J1Z2 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
IGKV1D-43A0A0B4J1Z2 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
IGKV1D-43A0A0B4J1Z2 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
IGKV1D-43A0A0B4J1Z2 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
IGKV1D-43A0A0B4J1Z2 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC15.74■□□□□ 0.11
IGKV1D-43A0A0B4J1Z2 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
IGKV1D-43A0A0B4J1Z2 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC15.74■□□□□ 0.11
IGKV1D-43A0A0B4J1Z2 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
IGKV1D-43A0A0B4J1Z2 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
IGKV1D-43A0A0B4J1Z2 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
IGKV1D-43A0A0B4J1Z2 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
IGKV1D-43A0A0B4J1Z2 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC15.74■□□□□ 0.11
IGKV1D-43A0A0B4J1Z2 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
IGKV1D-43A0A0B4J1Z2 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC15.74■□□□□ 0.11
IGKV1D-43A0A0B4J1Z2 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
IGKV1D-43A0A0B4J1Z2 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
IGKV1D-43A0A0B4J1Z2 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC15.74■□□□□ 0.11
IGKV1D-43A0A0B4J1Z2 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC15.74■□□□□ 0.11
IGKV1D-43A0A0B4J1Z2 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC15.74■□□□□ 0.11
IGKV1D-43A0A0B4J1Z2 TSPY22P-201ENST00000427496 604 ntBASIC15.74■□□□□ 0.11
IGKV1D-43A0A0B4J1Z2 DDX43P3-201ENST00000441064 443 ntBASIC15.74■□□□□ 0.11
IGKV1D-43A0A0B4J1Z2 CNP-204ENST00000472031 1019 ntTSL 2 BASIC15.74■□□□□ 0.11
IGKV1D-43A0A0B4J1Z2 NME3-204ENST00000563498 920 ntTSL 2 BASIC15.74■□□□□ 0.11
IGKV1D-43A0A0B4J1Z2 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC15.74■□□□□ 0.11
IGKV1D-43A0A0B4J1Z2 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC15.74■□□□□ 0.11
IGKV1D-43A0A0B4J1Z2 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC15.74■□□□□ 0.11
IGKV1D-43A0A0B4J1Z2 ANKRD20A8P-203ENST00000641373 517 ntBASIC15.74■□□□□ 0.11
IGKV1D-43A0A0B4J1Z2 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC15.74■□□□□ 0.11
IGKV1D-43A0A0B4J1Z2 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
IGKV1D-43A0A0B4J1Z2 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
IGKV1D-43A0A0B4J1Z2 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
IGKV1D-43A0A0B4J1Z2 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
IGKV1D-43A0A0B4J1Z2 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
IGKV1D-43A0A0B4J1Z2 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC15.74■□□□□ 0.11
IGKV1D-43A0A0B4J1Z2 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC15.74■□□□□ 0.11
IGKV1D-43A0A0B4J1Z2 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC15.74■□□□□ 0.11
IGKV1D-43A0A0B4J1Z2 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
IGKV1D-43A0A0B4J1Z2 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC15.74■□□□□ 0.11
IGKV1D-43A0A0B4J1Z2 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC15.74■□□□□ 0.11
IGKV1D-43A0A0B4J1Z2 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
IGKV1D-43A0A0B4J1Z2 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
IGKV1D-43A0A0B4J1Z2 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC15.73■□□□□ 0.11
IGKV1D-43A0A0B4J1Z2 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
IGKV1D-43A0A0B4J1Z2 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC15.73■□□□□ 0.11
IGKV1D-43A0A0B4J1Z2 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC15.73■□□□□ 0.11
IGKV1D-43A0A0B4J1Z2 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC15.73■□□□□ 0.11
IGKV1D-43A0A0B4J1Z2 AC005332.1-201ENST00000577698 1310 ntBASIC15.73■□□□□ 0.11
IGKV1D-43A0A0B4J1Z2 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
IGKV1D-43A0A0B4J1Z2 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC15.73■□□□□ 0.11
IGKV1D-43A0A0B4J1Z2 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC15.73■□□□□ 0.11
IGKV1D-43A0A0B4J1Z2 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
IGKV1D-43A0A0B4J1Z2 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
IGKV1D-43A0A0B4J1Z2 AC012313.1-201ENST00000593393 3059 ntBASIC15.73■□□□□ 0.11
IGKV1D-43A0A0B4J1Z2 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
IGKV1D-43A0A0B4J1Z2 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
IGKV1D-43A0A0B4J1Z2 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
IGKV1D-43A0A0B4J1Z2 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC15.73■□□□□ 0.11
IGKV1D-43A0A0B4J1Z2 FXN-203ENST00000396366 922 ntTSL 2 BASIC15.73■□□□□ 0.11
IGKV1D-43A0A0B4J1Z2 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
IGKV1D-43A0A0B4J1Z2 AL845331.1-201ENST00000424978 1190 ntBASIC15.73■□□□□ 0.11
IGKV1D-43A0A0B4J1Z2 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
IGKV1D-43A0A0B4J1Z2 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
IGKV1D-43A0A0B4J1Z2 FAM86EP-206ENST00000510506 987 ntBASIC15.73■□□□□ 0.11
IGKV1D-43A0A0B4J1Z2 PTK2-216ENST00000519881 863 ntTSL 3 BASIC15.73■□□□□ 0.11
IGKV1D-43A0A0B4J1Z2 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC15.73■□□□□ 0.11
IGKV1D-43A0A0B4J1Z2 AC011498.5-201ENST00000592027 486 ntBASIC15.73■□□□□ 0.11
IGKV1D-43A0A0B4J1Z2 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC15.73■□□□□ 0.11
IGKV1D-43A0A0B4J1Z2 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC15.73■□□□□ 0.11
IGKV1D-43A0A0B4J1Z2 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
IGKV1D-43A0A0B4J1Z2 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
IGKV1D-43A0A0B4J1Z2 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
IGKV1D-43A0A0B4J1Z2 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
IGKV1D-43A0A0B4J1Z2 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
IGKV1D-43A0A0B4J1Z2 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
IGKV1D-43A0A0B4J1Z2 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
IGKV1D-43A0A0B4J1Z2 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
IGKV1D-43A0A0B4J1Z2 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
IGKV1D-43A0A0B4J1Z2 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
IGKV1D-43A0A0B4J1Z2 HLA-J-201ENST00000462773 1622 ntBASIC15.72■□□□□ 0.11
IGKV1D-43A0A0B4J1Z2 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
IGKV1D-43A0A0B4J1Z2 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
IGKV1D-43A0A0B4J1Z2 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC15.72■□□□□ 0.11
IGKV1D-43A0A0B4J1Z2 BET1L-202ENST00000332865 533 ntTSL 5 BASIC15.72■□□□□ 0.11
IGKV1D-43A0A0B4J1Z2 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
IGKV1D-43A0A0B4J1Z2 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC15.72■□□□□ 0.11
IGKV1D-43A0A0B4J1Z2 RN7SL606P-201ENST00000472779 293 ntBASIC15.72■□□□□ 0.11
IGKV1D-43A0A0B4J1Z2 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC15.72■□□□□ 0.11
IGKV1D-43A0A0B4J1Z2 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
IGKV1D-43A0A0B4J1Z2 CD320-202ENST00000537716 1119 ntTSL 2 BASIC15.72■□□□□ 0.11
IGKV1D-43A0A0B4J1Z2 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms