Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC16.68■□□□□ 0.26
TRBV5-3A0A0A0MS03 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC16.68■□□□□ 0.26
TRBV5-3A0A0A0MS03 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.68■□□□□ 0.26
TRBV5-3A0A0A0MS03 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC16.68■□□□□ 0.26
TRBV5-3A0A0A0MS03 RASA4DP-201ENST00000460726 1199 ntBASIC16.68■□□□□ 0.26
TRBV5-3A0A0A0MS03 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRBV5-3A0A0A0MS03 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC16.68■□□□□ 0.26
TRBV5-3A0A0A0MS03 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.68■□□□□ 0.26
TRBV5-3A0A0A0MS03 AC034232.1-201ENST00000506026 1064 ntBASIC16.68■□□□□ 0.26
TRBV5-3A0A0A0MS03 AC112698.1-201ENST00000510299 916 ntBASIC16.68■□□□□ 0.26
TRBV5-3A0A0A0MS03 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC16.68■□□□□ 0.26
TRBV5-3A0A0A0MS03 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
TRBV5-3A0A0A0MS03 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC16.68■□□□□ 0.26
TRBV5-3A0A0A0MS03 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRBV5-3A0A0A0MS03 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRBV5-3A0A0A0MS03 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRBV5-3A0A0A0MS03 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRBV5-3A0A0A0MS03 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRBV5-3A0A0A0MS03 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.68■□□□□ 0.26
TRBV5-3A0A0A0MS03 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRBV5-3A0A0A0MS03 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRBV5-3A0A0A0MS03 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRBV5-3A0A0A0MS03 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRBV5-3A0A0A0MS03 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC16.67■□□□□ 0.26
TRBV5-3A0A0A0MS03 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRBV5-3A0A0A0MS03 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRBV5-3A0A0A0MS03 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRBV5-3A0A0A0MS03 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRBV5-3A0A0A0MS03 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.67■□□□□ 0.26
TRBV5-3A0A0A0MS03 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRBV5-3A0A0A0MS03 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRBV5-3A0A0A0MS03 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRBV5-3A0A0A0MS03 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
TRBV5-3A0A0A0MS03 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRBV5-3A0A0A0MS03 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
TRBV5-3A0A0A0MS03 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.67■□□□□ 0.26
TRBV5-3A0A0A0MS03 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRBV5-3A0A0A0MS03 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.67■□□□□ 0.26
TRBV5-3A0A0A0MS03 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC16.67■□□□□ 0.26
TRBV5-3A0A0A0MS03 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRBV5-3A0A0A0MS03 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC16.67■□□□□ 0.26
TRBV5-3A0A0A0MS03 AL136038.4-201ENST00000603606 1261 ntBASIC16.67■□□□□ 0.26
TRBV5-3A0A0A0MS03 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC16.67■□□□□ 0.26
TRBV5-3A0A0A0MS03 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.67■□□□□ 0.26
TRBV5-3A0A0A0MS03 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRBV5-3A0A0A0MS03 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRBV5-3A0A0A0MS03 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.67■□□□□ 0.26
TRBV5-3A0A0A0MS03 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRBV5-3A0A0A0MS03 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
TRBV5-3A0A0A0MS03 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRBV5-3A0A0A0MS03 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.67■□□□□ 0.26
TRBV5-3A0A0A0MS03 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRBV5-3A0A0A0MS03 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
TRBV5-3A0A0A0MS03 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRBV5-3A0A0A0MS03 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
TRBV5-3A0A0A0MS03 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRBV5-3A0A0A0MS03 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRBV5-3A0A0A0MS03 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
TRBV5-3A0A0A0MS03 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.66■□□□□ 0.26
TRBV5-3A0A0A0MS03 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.66■□□□□ 0.26
TRBV5-3A0A0A0MS03 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRBV5-3A0A0A0MS03 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRBV5-3A0A0A0MS03 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.66■□□□□ 0.26
TRBV5-3A0A0A0MS03 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
TRBV5-3A0A0A0MS03 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRBV5-3A0A0A0MS03 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRBV5-3A0A0A0MS03 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.66■□□□□ 0.26
TRBV5-3A0A0A0MS03 TNRC18P3-201ENST00000441896 2691 ntBASIC16.66■□□□□ 0.26
TRBV5-3A0A0A0MS03 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRBV5-3A0A0A0MS03 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRBV5-3A0A0A0MS03 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRBV5-3A0A0A0MS03 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRBV5-3A0A0A0MS03 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRBV5-3A0A0A0MS03 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRBV5-3A0A0A0MS03 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.66■□□□□ 0.26
TRBV5-3A0A0A0MS03 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.66■□□□□ 0.26
TRBV5-3A0A0A0MS03 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRBV5-3A0A0A0MS03 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRBV5-3A0A0A0MS03 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRBV5-3A0A0A0MS03 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRBV5-3A0A0A0MS03 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRBV5-3A0A0A0MS03 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRBV5-3A0A0A0MS03 SLC25A1P3-201ENST00000395415 828 ntBASIC16.66■□□□□ 0.26
TRBV5-3A0A0A0MS03 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRBV5-3A0A0A0MS03 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
TRBV5-3A0A0A0MS03 HLA-F-220ENST00000434407 884 ntBASIC16.66■□□□□ 0.26
TRBV5-3A0A0A0MS03 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC16.66■□□□□ 0.26
TRBV5-3A0A0A0MS03 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
TRBV5-3A0A0A0MS03 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
TRBV5-3A0A0A0MS03 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRBV5-3A0A0A0MS03 RPS20-210ENST00000523936 899 ntTSL 2 BASIC16.66■□□□□ 0.26
TRBV5-3A0A0A0MS03 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC16.66■□□□□ 0.26
TRBV5-3A0A0A0MS03 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.66■□□□□ 0.26
TRBV5-3A0A0A0MS03 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRBV5-3A0A0A0MS03 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRBV5-3A0A0A0MS03 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRBV5-3A0A0A0MS03 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.66■□□□□ 0.26
TRBV5-3A0A0A0MS03 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRBV5-3A0A0A0MS03 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRBV5-3A0A0A0MS03 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms