Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
SCN10AQ9Y5Y9 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.39■□□□□ 0.69
SCN10AQ9Y5Y9 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.39■□□□□ 0.69
SCN10AQ9Y5Y9 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.39■□□□□ 0.69
SCN10AQ9Y5Y9 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
SCN10AQ9Y5Y9 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SCN10AQ9Y5Y9 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.39■□□□□ 0.69
SCN10AQ9Y5Y9 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SCN10AQ9Y5Y9 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
SCN10AQ9Y5Y9 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SCN10AQ9Y5Y9 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.39■□□□□ 0.69
SCN10AQ9Y5Y9 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
SCN10AQ9Y5Y9 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SCN10AQ9Y5Y9 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SCN10AQ9Y5Y9 CYMP-203ENST00000474680 1263 ntBASIC19.39■□□□□ 0.69
SCN10AQ9Y5Y9 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC19.39■□□□□ 0.69
SCN10AQ9Y5Y9 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC19.39■□□□□ 0.69
SCN10AQ9Y5Y9 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC19.39■□□□□ 0.69
SCN10AQ9Y5Y9 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC19.39■□□□□ 0.69
SCN10AQ9Y5Y9 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.39■□□□□ 0.69
SCN10AQ9Y5Y9 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC19.39■□□□□ 0.69
SCN10AQ9Y5Y9 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.38■□□□□ 0.69
SCN10AQ9Y5Y9 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.38■□□□□ 0.69
SCN10AQ9Y5Y9 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC19.38■□□□□ 0.69
SCN10AQ9Y5Y9 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC19.38■□□□□ 0.69
SCN10AQ9Y5Y9 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SCN10AQ9Y5Y9 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
SCN10AQ9Y5Y9 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SCN10AQ9Y5Y9 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC19.38■□□□□ 0.69
SCN10AQ9Y5Y9 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC19.38■□□□□ 0.69
SCN10AQ9Y5Y9 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC19.38■□□□□ 0.69
SCN10AQ9Y5Y9 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SCN10AQ9Y5Y9 CD82-202ENST00000342935 967 ntTSL 5 BASIC19.38■□□□□ 0.69
SCN10AQ9Y5Y9 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC19.38■□□□□ 0.69
SCN10AQ9Y5Y9 PON3-203ENST00000427422 894 ntTSL 3 BASIC19.38■□□□□ 0.69
SCN10AQ9Y5Y9 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SCN10AQ9Y5Y9 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
SCN10AQ9Y5Y9 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC19.38■□□□□ 0.69
SCN10AQ9Y5Y9 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC19.38■□□□□ 0.69
SCN10AQ9Y5Y9 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SCN10AQ9Y5Y9 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC19.38■□□□□ 0.69
SCN10AQ9Y5Y9 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SCN10AQ9Y5Y9 WIZP1-201ENST00000531444 2299 ntBASIC19.38■□□□□ 0.69
SCN10AQ9Y5Y9 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SCN10AQ9Y5Y9 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SCN10AQ9Y5Y9 SLC25A24-204ENST00000569674 2357 ntBASIC19.38■□□□□ 0.69
SCN10AQ9Y5Y9 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SCN10AQ9Y5Y9 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
SCN10AQ9Y5Y9 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SCN10AQ9Y5Y9 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SCN10AQ9Y5Y9 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SCN10AQ9Y5Y9 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
SCN10AQ9Y5Y9 AC004877.2-201ENST00000623941 599 ntBASIC19.37■□□□□ 0.69
SCN10AQ9Y5Y9 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC19.37■□□□□ 0.69
SCN10AQ9Y5Y9 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
SCN10AQ9Y5Y9 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.37■□□□□ 0.69
SCN10AQ9Y5Y9 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
SCN10AQ9Y5Y9 AC135776.1-201ENST00000319817 2481 ntBASIC19.37■□□□□ 0.69
SCN10AQ9Y5Y9 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SCN10AQ9Y5Y9 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SCN10AQ9Y5Y9 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC19.37■□□□□ 0.69
SCN10AQ9Y5Y9 GGTLC5P-201ENST00000617623 998 ntBASIC19.37■□□□□ 0.69
SCN10AQ9Y5Y9 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SCN10AQ9Y5Y9 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC19.37■□□□□ 0.69
SCN10AQ9Y5Y9 AC097637.2-201ENST00000624096 1997 ntBASIC19.37■□□□□ 0.69
SCN10AQ9Y5Y9 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SCN10AQ9Y5Y9 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
SCN10AQ9Y5Y9 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SCN10AQ9Y5Y9 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.37■□□□□ 0.69
SCN10AQ9Y5Y9 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SCN10AQ9Y5Y9 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SCN10AQ9Y5Y9 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.36■□□□□ 0.69
SCN10AQ9Y5Y9 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SCN10AQ9Y5Y9 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
SCN10AQ9Y5Y9 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
SCN10AQ9Y5Y9 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SCN10AQ9Y5Y9 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SCN10AQ9Y5Y9 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SCN10AQ9Y5Y9 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SCN10AQ9Y5Y9 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC19.36■□□□□ 0.69
SCN10AQ9Y5Y9 AL031432.2-201ENST00000566714 459 ntBASIC19.36■□□□□ 0.69
SCN10AQ9Y5Y9 AL928711.1-201ENST00000570165 459 ntBASIC19.36■□□□□ 0.69
SCN10AQ9Y5Y9 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC19.36■□□□□ 0.69
SCN10AQ9Y5Y9 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC19.36■□□□□ 0.69
SCN10AQ9Y5Y9 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC19.36■□□□□ 0.69
SCN10AQ9Y5Y9 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SCN10AQ9Y5Y9 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SCN10AQ9Y5Y9 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SCN10AQ9Y5Y9 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC19.36■□□□□ 0.69
SCN10AQ9Y5Y9 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC19.36■□□□□ 0.69
SCN10AQ9Y5Y9 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.36■□□□□ 0.69
SCN10AQ9Y5Y9 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.36■□□□□ 0.69
SCN10AQ9Y5Y9 AL590787.1-201ENST00000568856 1315 ntBASIC19.36■□□□□ 0.69
SCN10AQ9Y5Y9 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SCN10AQ9Y5Y9 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SCN10AQ9Y5Y9 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SCN10AQ9Y5Y9 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC19.35■□□□□ 0.69
SCN10AQ9Y5Y9 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SCN10AQ9Y5Y9 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC19.35■□□□□ 0.69
SCN10AQ9Y5Y9 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms