Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
PCDHGA4Q9Y5G9 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGA4Q9Y5G9 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGA4Q9Y5G9 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGA4Q9Y5G9 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGA4Q9Y5G9 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.67■□□□□ 0.42
PCDHGA4Q9Y5G9 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGA4Q9Y5G9 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.67■□□□□ 0.42
PCDHGA4Q9Y5G9 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGA4Q9Y5G9 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGA4Q9Y5G9 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC17.67■□□□□ 0.42
PCDHGA4Q9Y5G9 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGA4Q9Y5G9 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGA4Q9Y5G9 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.67■□□□□ 0.42
PCDHGA4Q9Y5G9 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGA4Q9Y5G9 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGA4Q9Y5G9 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.66■□□□□ 0.42
PCDHGA4Q9Y5G9 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGA4Q9Y5G9 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGA4Q9Y5G9 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGA4Q9Y5G9 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGA4Q9Y5G9 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGA4Q9Y5G9 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGA4Q9Y5G9 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGA4Q9Y5G9 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGA4Q9Y5G9 KRT8P26-201ENST00000534154 1276 ntBASIC17.66■□□□□ 0.42
PCDHGA4Q9Y5G9 AC006518.1-201ENST00000541449 943 ntBASIC17.66■□□□□ 0.42
PCDHGA4Q9Y5G9 AC009065.1-201ENST00000564055 1225 ntBASIC17.66■□□□□ 0.42
PCDHGA4Q9Y5G9 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.66■□□□□ 0.42
PCDHGA4Q9Y5G9 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGA4Q9Y5G9 AC018695.7-201ENST00000624587 2492 ntBASIC17.66■□□□□ 0.42
PCDHGA4Q9Y5G9 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
PCDHGA4Q9Y5G9 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGA4Q9Y5G9 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.66■□□□□ 0.42
PCDHGA4Q9Y5G9 NOC2LP2-201ENST00000407594 1944 ntBASIC17.66■□□□□ 0.42
PCDHGA4Q9Y5G9 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGA4Q9Y5G9 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGA4Q9Y5G9 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
PCDHGA4Q9Y5G9 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGA4Q9Y5G9 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.66■□□□□ 0.42
PCDHGA4Q9Y5G9 AL162741.1-201ENST00000565563 1558 ntBASIC17.66■□□□□ 0.42
PCDHGA4Q9Y5G9 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGA4Q9Y5G9 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGA4Q9Y5G9 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGA4Q9Y5G9 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGA4Q9Y5G9 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.65■□□□□ 0.42
PCDHGA4Q9Y5G9 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGA4Q9Y5G9 LRTM1-201ENST00000273286 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGA4Q9Y5G9 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
PCDHGA4Q9Y5G9 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
PCDHGA4Q9Y5G9 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGA4Q9Y5G9 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGA4Q9Y5G9 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGA4Q9Y5G9 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.65■□□□□ 0.42
PCDHGA4Q9Y5G9 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
PCDHGA4Q9Y5G9 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
PCDHGA4Q9Y5G9 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
PCDHGA4Q9Y5G9 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGA4Q9Y5G9 CHCHD2P8-201ENST00000429873 447 ntBASIC17.65■□□□□ 0.42
PCDHGA4Q9Y5G9 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
PCDHGA4Q9Y5G9 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
PCDHGA4Q9Y5G9 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.65■□□□□ 0.42
PCDHGA4Q9Y5G9 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC17.65■□□□□ 0.42
PCDHGA4Q9Y5G9 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.65■□□□□ 0.42
PCDHGA4Q9Y5G9 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGA4Q9Y5G9 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
PCDHGA4Q9Y5G9 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGA4Q9Y5G9 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGA4Q9Y5G9 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.65■□□□□ 0.42
PCDHGA4Q9Y5G9 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.65■□□□□ 0.42
PCDHGA4Q9Y5G9 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.65■□□□□ 0.42
PCDHGA4Q9Y5G9 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
PCDHGA4Q9Y5G9 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGA4Q9Y5G9 PKD1P1-201ENST00000458669 6805 ntBASIC17.65■□□□□ 0.42
PCDHGA4Q9Y5G9 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.65■□□□□ 0.42
PCDHGA4Q9Y5G9 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGA4Q9Y5G9 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGA4Q9Y5G9 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
PCDHGA4Q9Y5G9 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
PCDHGA4Q9Y5G9 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
PCDHGA4Q9Y5G9 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
PCDHGA4Q9Y5G9 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
PCDHGA4Q9Y5G9 C8orf49-201ENST00000525043 1968 ntBASIC17.64■□□□□ 0.41
PCDHGA4Q9Y5G9 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
PCDHGA4Q9Y5G9 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.64■□□□□ 0.41
PCDHGA4Q9Y5G9 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGA4Q9Y5G9 AC068418.2-201ENST00000577309 3703 ntBASIC17.64■□□□□ 0.41
PCDHGA4Q9Y5G9 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGA4Q9Y5G9 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGA4Q9Y5G9 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGA4Q9Y5G9 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGA4Q9Y5G9 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGA4Q9Y5G9 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.64■□□□□ 0.41
PCDHGA4Q9Y5G9 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGA4Q9Y5G9 MIR149-201ENST00000384879 89 ntBASIC17.64■□□□□ 0.41
PCDHGA4Q9Y5G9 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
PCDHGA4Q9Y5G9 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGA4Q9Y5G9 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.64■□□□□ 0.41
PCDHGA4Q9Y5G9 KATNBL1P2-201ENST00000433311 835 ntBASIC17.64■□□□□ 0.41
PCDHGA4Q9Y5G9 AC009078.2-202ENST00000463353 338 ntBASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms