Protein–RNA interactions for Protein: Q9Y577

TRIM17, E3 ubiquitin-protein ligase TRIM17, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM17Q9Y577 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC20.05■□□□□ 0.8
TRIM17Q9Y577 AL353135.1-201ENST00000606729 504 ntBASIC20.05■□□□□ 0.8
TRIM17Q9Y577 MED16-214ENST00000617672 554 ntTSL 5 BASIC20.05■□□□□ 0.8
TRIM17Q9Y577 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM17Q9Y577 SNAI3-AS1-205ENST00000568633 2096 ntBASIC20.05■□□□□ 0.8
TRIM17Q9Y577 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM17Q9Y577 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
TRIM17Q9Y577 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM17Q9Y577 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC20.05■□□□□ 0.8
TRIM17Q9Y577 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM17Q9Y577 AL353593.2-201ENST00000602529 1483 ntBASIC20.05■□□□□ 0.8
TRIM17Q9Y577 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.04■□□□□ 0.8
TRIM17Q9Y577 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM17Q9Y577 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
TRIM17Q9Y577 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM17Q9Y577 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
TRIM17Q9Y577 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.04■□□□□ 0.8
TRIM17Q9Y577 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
TRIM17Q9Y577 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC20.04■□□□□ 0.8
TRIM17Q9Y577 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
TRIM17Q9Y577 CNN2P2-201ENST00000443536 909 ntBASIC20.04■□□□□ 0.8
TRIM17Q9Y577 CNN2P3-201ENST00000450201 906 ntBASIC20.04■□□□□ 0.8
TRIM17Q9Y577 UGT1A2P-201ENST00000454886 866 ntBASIC20.04■□□□□ 0.8
TRIM17Q9Y577 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
TRIM17Q9Y577 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC20.04■□□□□ 0.8
TRIM17Q9Y577 AL136317.3-201ENST00000618497 906 ntBASIC20.04■□□□□ 0.8
TRIM17Q9Y577 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
TRIM17Q9Y577 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC20.04■□□□□ 0.8
TRIM17Q9Y577 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC20.04■□□□□ 0.8
TRIM17Q9Y577 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM17Q9Y577 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM17Q9Y577 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
TRIM17Q9Y577 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM17Q9Y577 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.04■□□□□ 0.8
TRIM17Q9Y577 AC125437.2-201ENST00000625180 2167 ntBASIC20.04■□□□□ 0.8
TRIM17Q9Y577 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM17Q9Y577 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM17Q9Y577 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM17Q9Y577 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM17Q9Y577 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM17Q9Y577 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
TRIM17Q9Y577 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM17Q9Y577 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM17Q9Y577 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM17Q9Y577 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM17Q9Y577 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM17Q9Y577 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM17Q9Y577 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.03■□□□□ 0.8
TRIM17Q9Y577 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
TRIM17Q9Y577 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM17Q9Y577 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
TRIM17Q9Y577 AC003669.1-201ENST00000334569 611 ntBASIC20.03■□□□□ 0.8
TRIM17Q9Y577 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM17Q9Y577 BAD-202ENST00000394531 631 ntTSL 3 BASIC20.03■□□□□ 0.8
TRIM17Q9Y577 MIR943-201ENST00000401286 94 ntBASIC20.03■□□□□ 0.8
TRIM17Q9Y577 CENPM-205ENST00000404067 905 ntTSL 3 BASIC20.03■□□□□ 0.8
TRIM17Q9Y577 KLF4P1-201ENST00000412782 1185 ntBASIC20.03■□□□□ 0.8
TRIM17Q9Y577 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC20.03■□□□□ 0.8
TRIM17Q9Y577 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC20.03■□□□□ 0.8
TRIM17Q9Y577 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC20.03■□□□□ 0.8
TRIM17Q9Y577 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM17Q9Y577 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC20.03■□□□□ 0.8
TRIM17Q9Y577 AL359881.2-201ENST00000602973 570 ntBASIC20.03■□□□□ 0.8
TRIM17Q9Y577 SERF2-217ENST00000630046 862 ntTSL 5 BASIC20.03■□□□□ 0.8
TRIM17Q9Y577 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC20.03■□□□□ 0.8
TRIM17Q9Y577 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC20.03■□□□□ 0.8
TRIM17Q9Y577 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC20.03■□□□□ 0.8
TRIM17Q9Y577 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM17Q9Y577 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC20.03■□□□□ 0.8
TRIM17Q9Y577 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM17Q9Y577 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM17Q9Y577 AC007952.6-201ENST00000573168 2673 ntBASIC20.02■□□□□ 0.8
TRIM17Q9Y577 AC003957.1-201ENST00000625108 2673 ntBASIC20.02■□□□□ 0.8
TRIM17Q9Y577 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM17Q9Y577 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM17Q9Y577 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.8
TRIM17Q9Y577 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
TRIM17Q9Y577 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM17Q9Y577 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM17Q9Y577 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
TRIM17Q9Y577 AP002414.1-201ENST00000391405 1147 ntBASIC20.02■□□□□ 0.8
TRIM17Q9Y577 GATB-205ENST00000508611 605 ntTSL 2 BASIC20.02■□□□□ 0.8
TRIM17Q9Y577 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC20.02■□□□□ 0.8
TRIM17Q9Y577 AP005018.1-201ENST00000525475 301 ntBASIC20.02■□□□□ 0.8
TRIM17Q9Y577 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC20.02■□□□□ 0.8
TRIM17Q9Y577 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC20.02■□□□□ 0.8
TRIM17Q9Y577 LINC02560-201ENST00000596379 459 ntBASIC20.02■□□□□ 0.8
TRIM17Q9Y577 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
TRIM17Q9Y577 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM17Q9Y577 AC006116.8-202ENST00000587620 1550 ntBASIC20.02■□□□□ 0.8
TRIM17Q9Y577 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC20.02■□□□□ 0.8
TRIM17Q9Y577 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM17Q9Y577 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC20.02■□□□□ 0.8
TRIM17Q9Y577 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.02■□□□□ 0.8
TRIM17Q9Y577 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.02■□□□□ 0.79
TRIM17Q9Y577 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.02■□□□□ 0.79
TRIM17Q9Y577 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TRIM17Q9Y577 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TRIM17Q9Y577 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.02■□□□□ 0.79
TRIM17Q9Y577 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms