Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC19.19■□□□□ 0.66
SSX2IPQ9Y2D8 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC19.19■□□□□ 0.66
SSX2IPQ9Y2D8 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC19.19■□□□□ 0.66
SSX2IPQ9Y2D8 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SSX2IPQ9Y2D8 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SSX2IPQ9Y2D8 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.19■□□□□ 0.66
SSX2IPQ9Y2D8 LINC00602-201ENST00000629776 2065 ntBASIC19.19■□□□□ 0.66
SSX2IPQ9Y2D8 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
SSX2IPQ9Y2D8 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
SSX2IPQ9Y2D8 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SSX2IPQ9Y2D8 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SSX2IPQ9Y2D8 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC19.19■□□□□ 0.66
SSX2IPQ9Y2D8 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SSX2IPQ9Y2D8 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SSX2IPQ9Y2D8 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SSX2IPQ9Y2D8 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SSX2IPQ9Y2D8 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SSX2IPQ9Y2D8 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SSX2IPQ9Y2D8 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SSX2IPQ9Y2D8 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SSX2IPQ9Y2D8 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SSX2IPQ9Y2D8 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
SSX2IPQ9Y2D8 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SSX2IPQ9Y2D8 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
SSX2IPQ9Y2D8 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SSX2IPQ9Y2D8 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SSX2IPQ9Y2D8 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SSX2IPQ9Y2D8 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SSX2IPQ9Y2D8 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC19.18■□□□□ 0.66
SSX2IPQ9Y2D8 KRT18P58-201ENST00000527480 1120 ntBASIC19.18■□□□□ 0.66
SSX2IPQ9Y2D8 COX5A-202ENST00000562233 441 ntTSL 3 BASIC19.18■□□□□ 0.66
SSX2IPQ9Y2D8 AC139887.3-201ENST00000568585 713 ntBASIC19.18■□□□□ 0.66
SSX2IPQ9Y2D8 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC19.18■□□□□ 0.66
SSX2IPQ9Y2D8 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC19.18■□□□□ 0.66
SSX2IPQ9Y2D8 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC19.18■□□□□ 0.66
SSX2IPQ9Y2D8 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC19.18■□□□□ 0.66
SSX2IPQ9Y2D8 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC19.18■□□□□ 0.66
SSX2IPQ9Y2D8 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SSX2IPQ9Y2D8 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SSX2IPQ9Y2D8 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SSX2IPQ9Y2D8 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
SSX2IPQ9Y2D8 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SSX2IPQ9Y2D8 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
SSX2IPQ9Y2D8 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
SSX2IPQ9Y2D8 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
SSX2IPQ9Y2D8 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SSX2IPQ9Y2D8 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SSX2IPQ9Y2D8 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SSX2IPQ9Y2D8 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
SSX2IPQ9Y2D8 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SSX2IPQ9Y2D8 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SSX2IPQ9Y2D8 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
SSX2IPQ9Y2D8 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
SSX2IPQ9Y2D8 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SSX2IPQ9Y2D8 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SSX2IPQ9Y2D8 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SSX2IPQ9Y2D8 AL049812.1-201ENST00000432563 2267 ntBASIC19.17■□□□□ 0.66
SSX2IPQ9Y2D8 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SSX2IPQ9Y2D8 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SSX2IPQ9Y2D8 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SSX2IPQ9Y2D8 CROCCP1-201ENST00000426910 5675 ntBASIC19.17■□□□□ 0.66
SSX2IPQ9Y2D8 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
SSX2IPQ9Y2D8 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SSX2IPQ9Y2D8 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC19.17■□□□□ 0.66
SSX2IPQ9Y2D8 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC19.17■□□□□ 0.66
SSX2IPQ9Y2D8 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
SSX2IPQ9Y2D8 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SSX2IPQ9Y2D8 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SSX2IPQ9Y2D8 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
SSX2IPQ9Y2D8 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.17■□□□□ 0.66
SSX2IPQ9Y2D8 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SSX2IPQ9Y2D8 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC19.17■□□□□ 0.66
SSX2IPQ9Y2D8 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
SSX2IPQ9Y2D8 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
SSX2IPQ9Y2D8 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
SSX2IPQ9Y2D8 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
SSX2IPQ9Y2D8 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SSX2IPQ9Y2D8 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SSX2IPQ9Y2D8 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.16■□□□□ 0.66
SSX2IPQ9Y2D8 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
SSX2IPQ9Y2D8 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.16■□□□□ 0.66
SSX2IPQ9Y2D8 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SSX2IPQ9Y2D8 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.16■□□□□ 0.66
SSX2IPQ9Y2D8 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC19.16■□□□□ 0.66
SSX2IPQ9Y2D8 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.16■□□□□ 0.66
SSX2IPQ9Y2D8 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.16■□□□□ 0.66
SSX2IPQ9Y2D8 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.16■□□□□ 0.66
SSX2IPQ9Y2D8 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.16■□□□□ 0.66
SSX2IPQ9Y2D8 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
SSX2IPQ9Y2D8 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC19.16■□□□□ 0.66
SSX2IPQ9Y2D8 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SSX2IPQ9Y2D8 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
SSX2IPQ9Y2D8 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SSX2IPQ9Y2D8 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
SSX2IPQ9Y2D8 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC19.16■□□□□ 0.66
SSX2IPQ9Y2D8 ABCD1P5-201ENST00000445663 754 ntBASIC19.16■□□□□ 0.66
SSX2IPQ9Y2D8 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
SSX2IPQ9Y2D8 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC19.16■□□□□ 0.66
SSX2IPQ9Y2D8 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC19.16■□□□□ 0.66
SSX2IPQ9Y2D8 AC106730.1-201ENST00000566722 1090 ntBASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms