Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
SPG7Q9UQ90 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
SPG7Q9UQ90 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SPG7Q9UQ90 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SPG7Q9UQ90 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
SPG7Q9UQ90 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC23.2■■□□□ 1.3
SPG7Q9UQ90 ELK2BP-201ENST00000415014 1224 ntBASIC23.2■■□□□ 1.3
SPG7Q9UQ90 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC23.2■■□□□ 1.3
SPG7Q9UQ90 KRT18P2-201ENST00000447938 1258 ntBASIC23.2■■□□□ 1.3
SPG7Q9UQ90 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC23.2■■□□□ 1.3
SPG7Q9UQ90 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC23.2■■□□□ 1.3
SPG7Q9UQ90 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC23.2■■□□□ 1.3
SPG7Q9UQ90 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC23.2■■□□□ 1.3
SPG7Q9UQ90 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC23.2■■□□□ 1.3
SPG7Q9UQ90 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC23.2■■□□□ 1.3
SPG7Q9UQ90 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC23.2■■□□□ 1.3
SPG7Q9UQ90 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SPG7Q9UQ90 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SPG7Q9UQ90 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC23.2■■□□□ 1.3
SPG7Q9UQ90 AC018445.3-201ENST00000624177 1945 ntBASIC23.2■■□□□ 1.3
SPG7Q9UQ90 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SPG7Q9UQ90 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SPG7Q9UQ90 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC23.19■■□□□ 1.3
SPG7Q9UQ90 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SPG7Q9UQ90 AC148477.5-201ENST00000625164 1645 ntBASIC23.19■■□□□ 1.3
SPG7Q9UQ90 NCF1C-201ENST00000438382 1427 ntBASIC23.19■■□□□ 1.3
SPG7Q9UQ90 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SPG7Q9UQ90 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
SPG7Q9UQ90 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC23.19■■□□□ 1.3
SPG7Q9UQ90 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC23.19■■□□□ 1.3
SPG7Q9UQ90 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
SPG7Q9UQ90 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SPG7Q9UQ90 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC23.19■■□□□ 1.3
SPG7Q9UQ90 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
SPG7Q9UQ90 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
SPG7Q9UQ90 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC23.19■■□□□ 1.3
SPG7Q9UQ90 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
SPG7Q9UQ90 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SPG7Q9UQ90 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC23.19■■□□□ 1.3
SPG7Q9UQ90 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SPG7Q9UQ90 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC23.19■■□□□ 1.3
SPG7Q9UQ90 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SPG7Q9UQ90 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC23.18■■□□□ 1.3
SPG7Q9UQ90 FUT8-AS1-201ENST00000621019 1521 ntBASIC23.18■■□□□ 1.3
SPG7Q9UQ90 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
SPG7Q9UQ90 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC23.18■■□□□ 1.3
SPG7Q9UQ90 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC23.18■■□□□ 1.3
SPG7Q9UQ90 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
SPG7Q9UQ90 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SPG7Q9UQ90 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
SPG7Q9UQ90 AC003669.1-201ENST00000334569 611 ntBASIC23.18■■□□□ 1.3
SPG7Q9UQ90 KLF4P1-201ENST00000412782 1185 ntBASIC23.18■■□□□ 1.3
SPG7Q9UQ90 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC23.18■■□□□ 1.3
SPG7Q9UQ90 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SPG7Q9UQ90 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC23.18■■□□□ 1.3
SPG7Q9UQ90 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC23.18■■□□□ 1.3
SPG7Q9UQ90 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
SPG7Q9UQ90 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SPG7Q9UQ90 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
SPG7Q9UQ90 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC23.18■■□□□ 1.3
SPG7Q9UQ90 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SPG7Q9UQ90 AL096828.2-201ENST00000567259 1965 ntBASIC23.18■■□□□ 1.3
SPG7Q9UQ90 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SPG7Q9UQ90 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SPG7Q9UQ90 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC23.17■■□□□ 1.3
SPG7Q9UQ90 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
SPG7Q9UQ90 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
SPG7Q9UQ90 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SPG7Q9UQ90 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
SPG7Q9UQ90 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SPG7Q9UQ90 CRYGEP-201ENST00000412192 528 ntBASIC23.17■■□□□ 1.3
SPG7Q9UQ90 PMS2P2-201ENST00000425039 1128 ntBASIC23.17■■□□□ 1.3
SPG7Q9UQ90 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC23.17■■□□□ 1.3
SPG7Q9UQ90 SIGLEC30P-201ENST00000455569 941 ntBASIC23.17■■□□□ 1.3
SPG7Q9UQ90 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC23.17■■□□□ 1.3
SPG7Q9UQ90 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC23.17■■□□□ 1.3
SPG7Q9UQ90 COX5A-206ENST00000568783 571 ntTSL 3 BASIC23.17■■□□□ 1.3
SPG7Q9UQ90 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC23.17■■□□□ 1.3
SPG7Q9UQ90 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC23.17■■□□□ 1.3
SPG7Q9UQ90 AC019129.2-201ENST00000609837 1235 ntBASIC23.17■■□□□ 1.3
SPG7Q9UQ90 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SPG7Q9UQ90 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SPG7Q9UQ90 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SPG7Q9UQ90 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SPG7Q9UQ90 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SPG7Q9UQ90 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SPG7Q9UQ90 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SPG7Q9UQ90 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
SPG7Q9UQ90 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
SPG7Q9UQ90 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SPG7Q9UQ90 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SPG7Q9UQ90 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC23.17■■□□□ 1.3
SPG7Q9UQ90 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SPG7Q9UQ90 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC23.16■■□□□ 1.3
SPG7Q9UQ90 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC23.16■■□□□ 1.3
SPG7Q9UQ90 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC23.16■■□□□ 1.3
SPG7Q9UQ90 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SPG7Q9UQ90 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
SPG7Q9UQ90 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SPG7Q9UQ90 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms