Protein–RNA interactions for Protein: Q9UJ98

STAG3, Cohesin subunit SA-3, humanhuman

Predictions only

Length 1,225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG3Q9UJ98 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC25.5■■□□□ 1.67
STAG3Q9UJ98 AC010654.1-201ENST00000615722 808 ntBASIC25.5■■□□□ 1.67
STAG3Q9UJ98 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
STAG3Q9UJ98 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC25.5■■□□□ 1.67
STAG3Q9UJ98 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
STAG3Q9UJ98 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
STAG3Q9UJ98 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
STAG3Q9UJ98 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC25.49■■□□□ 1.67
STAG3Q9UJ98 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC25.49■■□□□ 1.67
STAG3Q9UJ98 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
STAG3Q9UJ98 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC25.49■■□□□ 1.67
STAG3Q9UJ98 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
STAG3Q9UJ98 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
STAG3Q9UJ98 MRPL20P1-201ENST00000400819 433 ntBASIC25.49■■□□□ 1.67
STAG3Q9UJ98 ATP6V0CP3-201ENST00000417255 467 ntBASIC25.49■■□□□ 1.67
STAG3Q9UJ98 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC25.49■■□□□ 1.67
STAG3Q9UJ98 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC25.49■■□□□ 1.67
STAG3Q9UJ98 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC25.49■■□□□ 1.67
STAG3Q9UJ98 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC25.49■■□□□ 1.67
STAG3Q9UJ98 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
STAG3Q9UJ98 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
STAG3Q9UJ98 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC25.49■■□□□ 1.67
STAG3Q9UJ98 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC25.49■■□□□ 1.67
STAG3Q9UJ98 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
STAG3Q9UJ98 AL049757.1-201ENST00000616842 1596 ntBASIC25.48■■□□□ 1.67
STAG3Q9UJ98 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC25.48■■□□□ 1.67
STAG3Q9UJ98 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
STAG3Q9UJ98 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC25.48■■□□□ 1.67
STAG3Q9UJ98 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
STAG3Q9UJ98 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC25.48■■□□□ 1.67
STAG3Q9UJ98 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
STAG3Q9UJ98 AL035633.1-201ENST00000406139 838 ntBASIC25.48■■□□□ 1.67
STAG3Q9UJ98 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC25.48■■□□□ 1.67
STAG3Q9UJ98 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC25.48■■□□□ 1.67
STAG3Q9UJ98 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC25.48■■□□□ 1.67
STAG3Q9UJ98 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
STAG3Q9UJ98 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC25.48■■□□□ 1.67
STAG3Q9UJ98 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC25.48■■□□□ 1.67
STAG3Q9UJ98 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC25.48■■□□□ 1.67
STAG3Q9UJ98 AC010507.1-201ENST00000633895 436 ntBASIC25.48■■□□□ 1.67
STAG3Q9UJ98 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC25.48■■□□□ 1.67
STAG3Q9UJ98 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC25.48■■□□□ 1.67
STAG3Q9UJ98 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
STAG3Q9UJ98 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC25.48■■□□□ 1.67
STAG3Q9UJ98 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC25.47■■□□□ 1.67
STAG3Q9UJ98 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC25.47■■□□□ 1.67
STAG3Q9UJ98 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
STAG3Q9UJ98 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC25.47■■□□□ 1.67
STAG3Q9UJ98 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
STAG3Q9UJ98 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC25.47■■□□□ 1.67
STAG3Q9UJ98 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC25.47■■□□□ 1.67
STAG3Q9UJ98 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC25.47■■□□□ 1.67
STAG3Q9UJ98 FAM58CP-201ENST00000435741 640 ntBASIC25.47■■□□□ 1.67
STAG3Q9UJ98 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC25.47■■□□□ 1.67
STAG3Q9UJ98 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC25.47■■□□□ 1.67
STAG3Q9UJ98 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC25.47■■□□□ 1.67
STAG3Q9UJ98 KRT19P2-202ENST00000557173 1012 ntBASIC25.47■■□□□ 1.67
STAG3Q9UJ98 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC25.47■■□□□ 1.67
STAG3Q9UJ98 METTL23-205ENST00000588302 925 ntTSL 5 BASIC25.47■■□□□ 1.67
STAG3Q9UJ98 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC25.47■■□□□ 1.67
STAG3Q9UJ98 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC25.47■■□□□ 1.67
STAG3Q9UJ98 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC25.47■■□□□ 1.67
STAG3Q9UJ98 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
STAG3Q9UJ98 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
STAG3Q9UJ98 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
STAG3Q9UJ98 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC25.46■■□□□ 1.67
STAG3Q9UJ98 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
STAG3Q9UJ98 GID4-202ENST00000376345 1391 ntTSL 3 BASIC25.46■■□□□ 1.67
STAG3Q9UJ98 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
STAG3Q9UJ98 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
STAG3Q9UJ98 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC25.46■■□□□ 1.67
STAG3Q9UJ98 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC25.46■■□□□ 1.67
STAG3Q9UJ98 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
STAG3Q9UJ98 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC25.46■■□□□ 1.67
STAG3Q9UJ98 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC25.46■■□□□ 1.67
STAG3Q9UJ98 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC25.46■■□□□ 1.67
STAG3Q9UJ98 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC25.46■■□□□ 1.67
STAG3Q9UJ98 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC25.46■■□□□ 1.67
STAG3Q9UJ98 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC25.46■■□□□ 1.67
STAG3Q9UJ98 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC25.46■■□□□ 1.67
STAG3Q9UJ98 SPCS2P1-201ENST00000561636 679 ntBASIC25.46■■□□□ 1.67
STAG3Q9UJ98 AC096734.2-201ENST00000562054 433 ntBASIC25.46■■□□□ 1.67
STAG3Q9UJ98 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC25.46■■□□□ 1.67
STAG3Q9UJ98 AQP6-205ENST00000618286 829 ntTSL 5 BASIC25.46■■□□□ 1.67
STAG3Q9UJ98 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
STAG3Q9UJ98 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC25.46■■□□□ 1.67
STAG3Q9UJ98 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC25.46■■□□□ 1.67
STAG3Q9UJ98 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC25.46■■□□□ 1.67
STAG3Q9UJ98 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
STAG3Q9UJ98 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC25.46■■□□□ 1.67
STAG3Q9UJ98 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC25.45■■□□□ 1.67
STAG3Q9UJ98 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC25.45■■□□□ 1.67
STAG3Q9UJ98 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC25.45■■□□□ 1.67
STAG3Q9UJ98 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC25.45■■□□□ 1.67
STAG3Q9UJ98 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC25.45■■□□□ 1.67
STAG3Q9UJ98 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC25.45■■□□□ 1.67
STAG3Q9UJ98 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC25.45■■□□□ 1.66
STAG3Q9UJ98 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
STAG3Q9UJ98 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.66
STAG3Q9UJ98 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms