Protein–RNA interactions for Protein: Q9UI42

CPA4, Carboxypeptidase A4, humanhuman

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPA4Q9UI42 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.23■□□□□ 0.83
CPA4Q9UI42 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CPA4Q9UI42 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CPA4Q9UI42 PTCHD3P3-201ENST00000403073 906 ntBASIC20.23■□□□□ 0.83
CPA4Q9UI42 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC20.23■□□□□ 0.83
CPA4Q9UI42 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC20.23■□□□□ 0.83
CPA4Q9UI42 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC20.23■□□□□ 0.83
CPA4Q9UI42 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CPA4Q9UI42 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CPA4Q9UI42 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC20.23■□□□□ 0.83
CPA4Q9UI42 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC20.23■□□□□ 0.83
CPA4Q9UI42 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
CPA4Q9UI42 OR7E47P-204ENST00000575924 449 ntBASIC20.23■□□□□ 0.83
CPA4Q9UI42 AC091812.2-201ENST00000619081 385 ntBASIC20.23■□□□□ 0.83
CPA4Q9UI42 AL805961.1-202ENST00000641562 540 ntBASIC20.23■□□□□ 0.83
CPA4Q9UI42 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CPA4Q9UI42 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
CPA4Q9UI42 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CPA4Q9UI42 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC20.23■□□□□ 0.83
CPA4Q9UI42 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CPA4Q9UI42 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CPA4Q9UI42 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CPA4Q9UI42 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC20.22■□□□□ 0.83
CPA4Q9UI42 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CPA4Q9UI42 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CPA4Q9UI42 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CPA4Q9UI42 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CPA4Q9UI42 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CPA4Q9UI42 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.22■□□□□ 0.83
CPA4Q9UI42 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CPA4Q9UI42 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CPA4Q9UI42 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CPA4Q9UI42 RHOQP3-201ENST00000437982 621 ntBASIC20.22■□□□□ 0.83
CPA4Q9UI42 ACTG1P14-201ENST00000446382 1122 ntBASIC20.22■□□□□ 0.83
CPA4Q9UI42 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC20.22■□□□□ 0.83
CPA4Q9UI42 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC20.22■□□□□ 0.83
CPA4Q9UI42 RPL28-205ENST00000558131 444 ntTSL 5 BASIC20.22■□□□□ 0.83
CPA4Q9UI42 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
CPA4Q9UI42 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CPA4Q9UI42 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.22■□□□□ 0.83
CPA4Q9UI42 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CPA4Q9UI42 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC20.21■□□□□ 0.83
CPA4Q9UI42 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.21■□□□□ 0.83
CPA4Q9UI42 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CPA4Q9UI42 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CPA4Q9UI42 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CPA4Q9UI42 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CPA4Q9UI42 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CPA4Q9UI42 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CPA4Q9UI42 WBP2-203ENST00000433525 928 ntTSL 2 BASIC20.21■□□□□ 0.83
CPA4Q9UI42 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CPA4Q9UI42 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CPA4Q9UI42 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC20.21■□□□□ 0.83
CPA4Q9UI42 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC20.21■□□□□ 0.83
CPA4Q9UI42 TK1-204ENST00000590430 683 ntTSL 3 BASIC20.21■□□□□ 0.83
CPA4Q9UI42 AC004835.2-201ENST00000603762 682 ntBASIC20.21■□□□□ 0.83
CPA4Q9UI42 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CPA4Q9UI42 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CPA4Q9UI42 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
CPA4Q9UI42 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC20.21■□□□□ 0.83
CPA4Q9UI42 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CPA4Q9UI42 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CPA4Q9UI42 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC20.21■□□□□ 0.83
CPA4Q9UI42 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
CPA4Q9UI42 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CPA4Q9UI42 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CPA4Q9UI42 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CPA4Q9UI42 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CPA4Q9UI42 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC20.2■□□□□ 0.82
CPA4Q9UI42 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CPA4Q9UI42 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CPA4Q9UI42 AC003669.1-201ENST00000334569 611 ntBASIC20.2■□□□□ 0.82
CPA4Q9UI42 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
CPA4Q9UI42 AC004461.1-201ENST00000412461 403 ntBASIC20.2■□□□□ 0.82
CPA4Q9UI42 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC20.2■□□□□ 0.82
CPA4Q9UI42 AC092474.2-201ENST00000424288 719 ntBASIC20.2■□□□□ 0.82
CPA4Q9UI42 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CPA4Q9UI42 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC20.2■□□□□ 0.82
CPA4Q9UI42 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC20.2■□□□□ 0.82
CPA4Q9UI42 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC20.2■□□□□ 0.82
CPA4Q9UI42 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC20.2■□□□□ 0.82
CPA4Q9UI42 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CPA4Q9UI42 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC20.2■□□□□ 0.82
CPA4Q9UI42 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC20.2■□□□□ 0.82
CPA4Q9UI42 CITED2-204ENST00000618718 901 ntTSL 2 BASIC20.2■□□□□ 0.82
CPA4Q9UI42 AL513210.1-201ENST00000629608 234 ntBASIC20.2■□□□□ 0.82
CPA4Q9UI42 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC20.2■□□□□ 0.82
CPA4Q9UI42 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CPA4Q9UI42 AC073130.3-201ENST00000624389 2278 ntBASIC20.2■□□□□ 0.82
CPA4Q9UI42 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CPA4Q9UI42 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
CPA4Q9UI42 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CPA4Q9UI42 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC20.2■□□□□ 0.82
CPA4Q9UI42 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CPA4Q9UI42 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CPA4Q9UI42 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC20.19■□□□□ 0.82
CPA4Q9UI42 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CPA4Q9UI42 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CPA4Q9UI42 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
CPA4Q9UI42 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms