Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
HDAC6Q9UBN7 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HDAC6Q9UBN7 CCS-201ENST00000310190 942 ntTSL 5 BASIC20.17■□□□□ 0.82
HDAC6Q9UBN7 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
HDAC6Q9UBN7 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC20.17■□□□□ 0.82
HDAC6Q9UBN7 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HDAC6Q9UBN7 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC20.17■□□□□ 0.82
HDAC6Q9UBN7 AC148477.8-201ENST00000624298 468 ntBASIC20.17■□□□□ 0.82
HDAC6Q9UBN7 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HDAC6Q9UBN7 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HDAC6Q9UBN7 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HDAC6Q9UBN7 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HDAC6Q9UBN7 PODN-203ENST00000395871 2744 ntTSL 5 BASIC20.17■□□□□ 0.82
HDAC6Q9UBN7 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HDAC6Q9UBN7 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
HDAC6Q9UBN7 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC20.16■□□□□ 0.82
HDAC6Q9UBN7 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
HDAC6Q9UBN7 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HDAC6Q9UBN7 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HDAC6Q9UBN7 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
HDAC6Q9UBN7 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
HDAC6Q9UBN7 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HDAC6Q9UBN7 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC20.16■□□□□ 0.82
HDAC6Q9UBN7 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC20.16■□□□□ 0.82
HDAC6Q9UBN7 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC20.16■□□□□ 0.82
HDAC6Q9UBN7 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC20.16■□□□□ 0.82
HDAC6Q9UBN7 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC20.16■□□□□ 0.82
HDAC6Q9UBN7 AC008608.2-201ENST00000606089 416 ntBASIC20.16■□□□□ 0.82
HDAC6Q9UBN7 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
HDAC6Q9UBN7 AL499627.1-201ENST00000569373 2188 ntBASIC20.16■□□□□ 0.82
HDAC6Q9UBN7 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HDAC6Q9UBN7 AC112777.1-201ENST00000540175 1423 ntBASIC20.16■□□□□ 0.82
HDAC6Q9UBN7 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC20.16■□□□□ 0.82
HDAC6Q9UBN7 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HDAC6Q9UBN7 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC20.16■□□□□ 0.82
HDAC6Q9UBN7 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC20.16■□□□□ 0.82
HDAC6Q9UBN7 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HDAC6Q9UBN7 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HDAC6Q9UBN7 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
HDAC6Q9UBN7 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HDAC6Q9UBN7 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HDAC6Q9UBN7 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC20.15■□□□□ 0.82
HDAC6Q9UBN7 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC20.15■□□□□ 0.82
HDAC6Q9UBN7 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC20.15■□□□□ 0.82
HDAC6Q9UBN7 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC20.15■□□□□ 0.82
HDAC6Q9UBN7 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
HDAC6Q9UBN7 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
HDAC6Q9UBN7 MED22-202ENST00000371999 987 ntTSL 3 BASIC20.15■□□□□ 0.82
HDAC6Q9UBN7 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC20.15■□□□□ 0.82
HDAC6Q9UBN7 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
HDAC6Q9UBN7 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
HDAC6Q9UBN7 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
HDAC6Q9UBN7 KRT18P67-201ENST00000432816 1264 ntBASIC20.15■□□□□ 0.82
HDAC6Q9UBN7 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
HDAC6Q9UBN7 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
HDAC6Q9UBN7 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC20.15■□□□□ 0.82
HDAC6Q9UBN7 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HDAC6Q9UBN7 AF228730.7-201ENST00000641842 219 ntBASIC20.15■□□□□ 0.82
HDAC6Q9UBN7 IL9RP2-201ENST00000423948 1312 ntBASIC20.15■□□□□ 0.82
HDAC6Q9UBN7 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC20.15■□□□□ 0.82
HDAC6Q9UBN7 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
HDAC6Q9UBN7 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
HDAC6Q9UBN7 TP73-AS1-210ENST00000637775 1455 ntBASIC20.15■□□□□ 0.82
HDAC6Q9UBN7 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HDAC6Q9UBN7 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC20.15■□□□□ 0.82
HDAC6Q9UBN7 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
HDAC6Q9UBN7 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC20.15■□□□□ 0.82
HDAC6Q9UBN7 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
HDAC6Q9UBN7 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
HDAC6Q9UBN7 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
HDAC6Q9UBN7 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.82
HDAC6Q9UBN7 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC20.14■□□□□ 0.82
HDAC6Q9UBN7 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
HDAC6Q9UBN7 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
HDAC6Q9UBN7 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
HDAC6Q9UBN7 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
HDAC6Q9UBN7 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.14■□□□□ 0.81
HDAC6Q9UBN7 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
HDAC6Q9UBN7 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC20.14■□□□□ 0.81
HDAC6Q9UBN7 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
HDAC6Q9UBN7 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
HDAC6Q9UBN7 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
HDAC6Q9UBN7 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
HDAC6Q9UBN7 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
HDAC6Q9UBN7 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
HDAC6Q9UBN7 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
HDAC6Q9UBN7 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
HDAC6Q9UBN7 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC20.14■□□□□ 0.81
HDAC6Q9UBN7 AL031284.1-201ENST00000419297 478 ntBASIC20.14■□□□□ 0.81
HDAC6Q9UBN7 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC20.14■□□□□ 0.81
HDAC6Q9UBN7 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
HDAC6Q9UBN7 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC20.14■□□□□ 0.81
HDAC6Q9UBN7 GPALPP1-207ENST00000611650 899 ntBASIC20.14■□□□□ 0.81
HDAC6Q9UBN7 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
HDAC6Q9UBN7 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC20.14■□□□□ 0.81
HDAC6Q9UBN7 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
HDAC6Q9UBN7 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
HDAC6Q9UBN7 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
HDAC6Q9UBN7 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC20.14■□□□□ 0.81
HDAC6Q9UBN7 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms