Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC18.77■□□□□ 0.59
CHD7Q9P2D1 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC18.77■□□□□ 0.59
CHD7Q9P2D1 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.77■□□□□ 0.59
CHD7Q9P2D1 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CHD7Q9P2D1 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.59
CHD7Q9P2D1 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CHD7Q9P2D1 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
CHD7Q9P2D1 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHD7Q9P2D1 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHD7Q9P2D1 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.76■□□□□ 0.59
CHD7Q9P2D1 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.76■□□□□ 0.59
CHD7Q9P2D1 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHD7Q9P2D1 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHD7Q9P2D1 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHD7Q9P2D1 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHD7Q9P2D1 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CHD7Q9P2D1 RPS15P9-201ENST00000494093 319 ntBASIC18.76■□□□□ 0.59
CHD7Q9P2D1 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC18.76■□□□□ 0.59
CHD7Q9P2D1 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC18.76■□□□□ 0.59
CHD7Q9P2D1 VPS29-207ENST00000549970 818 ntTSL 3 BASIC18.76■□□□□ 0.59
CHD7Q9P2D1 AC008761.3-201ENST00000624803 892 ntBASIC18.76■□□□□ 0.59
CHD7Q9P2D1 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC18.76■□□□□ 0.59
CHD7Q9P2D1 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHD7Q9P2D1 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC18.76■□□□□ 0.59
CHD7Q9P2D1 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.76■□□□□ 0.59
CHD7Q9P2D1 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
CHD7Q9P2D1 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.76■□□□□ 0.59
CHD7Q9P2D1 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.76■□□□□ 0.59
CHD7Q9P2D1 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC18.76■□□□□ 0.59
CHD7Q9P2D1 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CHD7Q9P2D1 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC18.76■□□□□ 0.59
CHD7Q9P2D1 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC18.76■□□□□ 0.59
CHD7Q9P2D1 AC009093.7-201ENST00000623853 1223 ntBASIC18.76■□□□□ 0.59
CHD7Q9P2D1 HFE2-206ENST00000634927 506 ntTSL 4 BASIC18.76■□□□□ 0.59
CHD7Q9P2D1 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.76■□□□□ 0.59
CHD7Q9P2D1 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.76■□□□□ 0.59
CHD7Q9P2D1 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.76■□□□□ 0.59
CHD7Q9P2D1 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHD7Q9P2D1 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CHD7Q9P2D1 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHD7Q9P2D1 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CHD7Q9P2D1 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC18.76■□□□□ 0.59
CHD7Q9P2D1 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.76■□□□□ 0.59
CHD7Q9P2D1 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHD7Q9P2D1 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.75■□□□□ 0.59
CHD7Q9P2D1 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC18.75■□□□□ 0.59
CHD7Q9P2D1 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC18.75■□□□□ 0.59
CHD7Q9P2D1 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC18.75■□□□□ 0.59
CHD7Q9P2D1 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC18.75■□□□□ 0.59
CHD7Q9P2D1 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHD7Q9P2D1 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHD7Q9P2D1 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC18.75■□□□□ 0.59
CHD7Q9P2D1 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
CHD7Q9P2D1 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.75■□□□□ 0.59
CHD7Q9P2D1 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHD7Q9P2D1 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHD7Q9P2D1 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHD7Q9P2D1 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
CHD7Q9P2D1 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC18.75■□□□□ 0.59
CHD7Q9P2D1 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHD7Q9P2D1 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CHD7Q9P2D1 AC068137.2-201ENST00000605408 478 ntBASIC18.75■□□□□ 0.59
CHD7Q9P2D1 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CHD7Q9P2D1 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.75■□□□□ 0.59
CHD7Q9P2D1 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHD7Q9P2D1 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC18.75■□□□□ 0.59
CHD7Q9P2D1 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
CHD7Q9P2D1 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC18.75■□□□□ 0.59
CHD7Q9P2D1 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC18.75■□□□□ 0.59
CHD7Q9P2D1 AC004449.1-201ENST00000564240 433 ntBASIC18.75■□□□□ 0.59
CHD7Q9P2D1 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC18.75■□□□□ 0.59
CHD7Q9P2D1 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHD7Q9P2D1 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CHD7Q9P2D1 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHD7Q9P2D1 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
CHD7Q9P2D1 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CHD7Q9P2D1 AL020989.1-201ENST00000422979 469 ntBASIC18.74■□□□□ 0.59
CHD7Q9P2D1 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC18.74■□□□□ 0.59
CHD7Q9P2D1 SMN2-210ENST00000511812 867 ntTSL 2 BASIC18.74■□□□□ 0.59
CHD7Q9P2D1 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC18.74■□□□□ 0.59
CHD7Q9P2D1 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHD7Q9P2D1 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CHD7Q9P2D1 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CHD7Q9P2D1 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHD7Q9P2D1 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.74■□□□□ 0.59
CHD7Q9P2D1 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHD7Q9P2D1 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.74■□□□□ 0.59
CHD7Q9P2D1 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
CHD7Q9P2D1 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CHD7Q9P2D1 AC055876.3-201ENST00000431496 288 ntBASIC18.74■□□□□ 0.59
CHD7Q9P2D1 AC138649.4-201ENST00000612222 287 ntBASIC18.74■□□□□ 0.59
CHD7Q9P2D1 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CHD7Q9P2D1 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CHD7Q9P2D1 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CHD7Q9P2D1 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHD7Q9P2D1 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.74■□□□□ 0.59
CHD7Q9P2D1 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHD7Q9P2D1 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.73■□□□□ 0.59
CHD7Q9P2D1 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.73■□□□□ 0.59
CHD7Q9P2D1 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms