Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.84■□□□□ 0.45
TM9SF3Q9HD45 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.84■□□□□ 0.45
TM9SF3Q9HD45 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.84■□□□□ 0.45
TM9SF3Q9HD45 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.84■□□□□ 0.45
TM9SF3Q9HD45 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.84■□□□□ 0.45
TM9SF3Q9HD45 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TM9SF3Q9HD45 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TM9SF3Q9HD45 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.84■□□□□ 0.45
TM9SF3Q9HD45 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.84■□□□□ 0.45
TM9SF3Q9HD45 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.84■□□□□ 0.45
TM9SF3Q9HD45 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.84■□□□□ 0.45
TM9SF3Q9HD45 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.84■□□□□ 0.45
TM9SF3Q9HD45 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.84■□□□□ 0.45
TM9SF3Q9HD45 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.84■□□□□ 0.45
TM9SF3Q9HD45 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TM9SF3Q9HD45 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.84■□□□□ 0.45
TM9SF3Q9HD45 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.84■□□□□ 0.45
TM9SF3Q9HD45 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.84■□□□□ 0.45
TM9SF3Q9HD45 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TM9SF3Q9HD45 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.84■□□□□ 0.45
TM9SF3Q9HD45 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TM9SF3Q9HD45 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
TM9SF3Q9HD45 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TM9SF3Q9HD45 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TM9SF3Q9HD45 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TM9SF3Q9HD45 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TM9SF3Q9HD45 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TM9SF3Q9HD45 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TM9SF3Q9HD45 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TM9SF3Q9HD45 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.84■□□□□ 0.45
TM9SF3Q9HD45 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TM9SF3Q9HD45 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TM9SF3Q9HD45 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TM9SF3Q9HD45 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
TM9SF3Q9HD45 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TM9SF3Q9HD45 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
TM9SF3Q9HD45 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.83■□□□□ 0.45
TM9SF3Q9HD45 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TM9SF3Q9HD45 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
TM9SF3Q9HD45 AC018470.1-201ENST00000624790 3129 ntBASIC17.83■□□□□ 0.45
TM9SF3Q9HD45 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
TM9SF3Q9HD45 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.83■□□□□ 0.45
TM9SF3Q9HD45 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.83■□□□□ 0.45
TM9SF3Q9HD45 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
TM9SF3Q9HD45 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.83■□□□□ 0.45
TM9SF3Q9HD45 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TM9SF3Q9HD45 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.83■□□□□ 0.44
TM9SF3Q9HD45 RPS2P28-201ENST00000314255 741 ntBASIC17.83■□□□□ 0.44
TM9SF3Q9HD45 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.83■□□□□ 0.44
TM9SF3Q9HD45 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
TM9SF3Q9HD45 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TM9SF3Q9HD45 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.83■□□□□ 0.44
TM9SF3Q9HD45 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.83■□□□□ 0.44
TM9SF3Q9HD45 KRT18P65-201ENST00000439811 1286 ntBASIC17.83■□□□□ 0.44
TM9SF3Q9HD45 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.83■□□□□ 0.44
TM9SF3Q9HD45 POLD2P1-201ENST00000511220 997 ntBASIC17.83■□□□□ 0.44
TM9SF3Q9HD45 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.83■□□□□ 0.44
TM9SF3Q9HD45 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC17.83■□□□□ 0.44
TM9SF3Q9HD45 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC17.83■□□□□ 0.44
TM9SF3Q9HD45 AC116407.3-201ENST00000623905 1129 ntBASIC17.83■□□□□ 0.44
TM9SF3Q9HD45 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
TM9SF3Q9HD45 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
TM9SF3Q9HD45 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TM9SF3Q9HD45 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TM9SF3Q9HD45 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TM9SF3Q9HD45 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
TM9SF3Q9HD45 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
TM9SF3Q9HD45 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
TM9SF3Q9HD45 NOC2LP1-202ENST00000452600 2235 ntBASIC17.83■□□□□ 0.44
TM9SF3Q9HD45 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TM9SF3Q9HD45 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
TM9SF3Q9HD45 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TM9SF3Q9HD45 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TM9SF3Q9HD45 LTB4R2-202ENST00000528054 3092 ntBASIC17.83■□□□□ 0.44
TM9SF3Q9HD45 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.82■□□□□ 0.44
TM9SF3Q9HD45 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TM9SF3Q9HD45 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
TM9SF3Q9HD45 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TM9SF3Q9HD45 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.82■□□□□ 0.44
TM9SF3Q9HD45 AP005117.1-201ENST00000584346 1413 ntBASIC17.82■□□□□ 0.44
TM9SF3Q9HD45 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.82■□□□□ 0.44
TM9SF3Q9HD45 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
TM9SF3Q9HD45 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TM9SF3Q9HD45 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TM9SF3Q9HD45 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.82■□□□□ 0.44
TM9SF3Q9HD45 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TM9SF3Q9HD45 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TM9SF3Q9HD45 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
TM9SF3Q9HD45 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TM9SF3Q9HD45 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
TM9SF3Q9HD45 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
TM9SF3Q9HD45 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
TM9SF3Q9HD45 ABCD1P5-201ENST00000445663 754 ntBASIC17.82■□□□□ 0.44
TM9SF3Q9HD45 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TM9SF3Q9HD45 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC17.82■□□□□ 0.44
TM9SF3Q9HD45 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.82■□□□□ 0.44
TM9SF3Q9HD45 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.82■□□□□ 0.44
TM9SF3Q9HD45 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TM9SF3Q9HD45 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.82■□□□□ 0.44
TM9SF3Q9HD45 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms