Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CD248Q9HCU0 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CD248Q9HCU0 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CD248Q9HCU0 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC18.78■□□□□ 0.6
CD248Q9HCU0 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC18.78■□□□□ 0.6
CD248Q9HCU0 AC246785.2-201ENST00000432512 513 ntBASIC18.78■□□□□ 0.6
CD248Q9HCU0 DRAXINP1-201ENST00000437611 948 ntBASIC18.78■□□□□ 0.6
CD248Q9HCU0 NUS1P1-201ENST00000446295 882 ntBASIC18.78■□□□□ 0.6
CD248Q9HCU0 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.78■□□□□ 0.6
CD248Q9HCU0 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC18.78■□□□□ 0.6
CD248Q9HCU0 PRELID1P1-202ENST00000567272 903 ntBASIC18.78■□□□□ 0.6
CD248Q9HCU0 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CD248Q9HCU0 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CD248Q9HCU0 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
CD248Q9HCU0 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CD248Q9HCU0 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CD248Q9HCU0 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CD248Q9HCU0 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CD248Q9HCU0 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CD248Q9HCU0 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CD248Q9HCU0 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CD248Q9HCU0 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
CD248Q9HCU0 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CD248Q9HCU0 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CD248Q9HCU0 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.78■□□□□ 0.6
CD248Q9HCU0 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
CD248Q9HCU0 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CD248Q9HCU0 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.77■□□□□ 0.6
CD248Q9HCU0 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CD248Q9HCU0 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.77■□□□□ 0.6
CD248Q9HCU0 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CD248Q9HCU0 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.77■□□□□ 0.6
CD248Q9HCU0 AC135776.1-201ENST00000319817 2481 ntBASIC18.77■□□□□ 0.6
CD248Q9HCU0 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CD248Q9HCU0 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CD248Q9HCU0 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CD248Q9HCU0 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CD248Q9HCU0 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CD248Q9HCU0 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CD248Q9HCU0 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CD248Q9HCU0 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.77■□□□□ 0.6
CD248Q9HCU0 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CD248Q9HCU0 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC18.77■□□□□ 0.6
CD248Q9HCU0 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC18.77■□□□□ 0.6
CD248Q9HCU0 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC18.77■□□□□ 0.6
CD248Q9HCU0 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.77■□□□□ 0.6
CD248Q9HCU0 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CD248Q9HCU0 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CD248Q9HCU0 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.77■□□□□ 0.6
CD248Q9HCU0 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.77■□□□□ 0.6
CD248Q9HCU0 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CD248Q9HCU0 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.77■□□□□ 0.59
CD248Q9HCU0 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CD248Q9HCU0 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
CD248Q9HCU0 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CD248Q9HCU0 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CD248Q9HCU0 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18.76■□□□□ 0.59
CD248Q9HCU0 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CD248Q9HCU0 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CD248Q9HCU0 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.76■□□□□ 0.59
CD248Q9HCU0 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.76■□□□□ 0.59
CD248Q9HCU0 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CD248Q9HCU0 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CD248Q9HCU0 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CD248Q9HCU0 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CD248Q9HCU0 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CD248Q9HCU0 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
CD248Q9HCU0 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CD248Q9HCU0 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CD248Q9HCU0 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CD248Q9HCU0 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.76■□□□□ 0.59
CD248Q9HCU0 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.76■□□□□ 0.59
CD248Q9HCU0 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.76■□□□□ 0.59
CD248Q9HCU0 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC18.76■□□□□ 0.59
CD248Q9HCU0 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
CD248Q9HCU0 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC18.76■□□□□ 0.59
CD248Q9HCU0 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC18.76■□□□□ 0.59
CD248Q9HCU0 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC18.76■□□□□ 0.59
CD248Q9HCU0 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CD248Q9HCU0 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CD248Q9HCU0 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC18.76■□□□□ 0.59
CD248Q9HCU0 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CD248Q9HCU0 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.76■□□□□ 0.59
CD248Q9HCU0 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CD248Q9HCU0 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
CD248Q9HCU0 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.76■□□□□ 0.59
CD248Q9HCU0 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CD248Q9HCU0 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
CD248Q9HCU0 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CD248Q9HCU0 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CD248Q9HCU0 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CD248Q9HCU0 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CD248Q9HCU0 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CD248Q9HCU0 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.75■□□□□ 0.59
CD248Q9HCU0 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CD248Q9HCU0 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CD248Q9HCU0 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CD248Q9HCU0 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CD248Q9HCU0 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CD248Q9HCU0 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms