Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
LRTM1Q9HBL6 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
LRTM1Q9HBL6 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LRTM1Q9HBL6 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LRTM1Q9HBL6 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.19■□□□□ 0.34
LRTM1Q9HBL6 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRTM1Q9HBL6 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRTM1Q9HBL6 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRTM1Q9HBL6 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.18■□□□□ 0.34
LRTM1Q9HBL6 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
LRTM1Q9HBL6 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.18■□□□□ 0.34
LRTM1Q9HBL6 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRTM1Q9HBL6 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRTM1Q9HBL6 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LRTM1Q9HBL6 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRTM1Q9HBL6 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
LRTM1Q9HBL6 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LRTM1Q9HBL6 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LRTM1Q9HBL6 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRTM1Q9HBL6 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.18■□□□□ 0.34
LRTM1Q9HBL6 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.18■□□□□ 0.34
LRTM1Q9HBL6 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.18■□□□□ 0.34
LRTM1Q9HBL6 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.18■□□□□ 0.34
LRTM1Q9HBL6 KRT18P65-201ENST00000439811 1286 ntBASIC17.18■□□□□ 0.34
LRTM1Q9HBL6 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.18■□□□□ 0.34
LRTM1Q9HBL6 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
LRTM1Q9HBL6 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.18■□□□□ 0.34
LRTM1Q9HBL6 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.18■□□□□ 0.34
LRTM1Q9HBL6 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.18■□□□□ 0.34
LRTM1Q9HBL6 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.18■□□□□ 0.34
LRTM1Q9HBL6 AC140113.3-201ENST00000605663 199 ntBASIC17.18■□□□□ 0.34
LRTM1Q9HBL6 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
LRTM1Q9HBL6 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRTM1Q9HBL6 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.18■□□□□ 0.34
LRTM1Q9HBL6 AL138688.1-201ENST00000624851 1594 ntBASIC17.18■□□□□ 0.34
LRTM1Q9HBL6 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.18■□□□□ 0.34
LRTM1Q9HBL6 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
LRTM1Q9HBL6 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.18■□□□□ 0.34
LRTM1Q9HBL6 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.18■□□□□ 0.34
LRTM1Q9HBL6 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LRTM1Q9HBL6 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LRTM1Q9HBL6 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.18■□□□□ 0.34
LRTM1Q9HBL6 KRT89P-201ENST00000620027 1478 ntBASIC17.18■□□□□ 0.34
LRTM1Q9HBL6 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LRTM1Q9HBL6 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.17■□□□□ 0.34
LRTM1Q9HBL6 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LRTM1Q9HBL6 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LRTM1Q9HBL6 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.17■□□□□ 0.34
LRTM1Q9HBL6 AC009949.1-201ENST00000623048 1830 ntBASIC17.17■□□□□ 0.34
LRTM1Q9HBL6 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
LRTM1Q9HBL6 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRTM1Q9HBL6 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.17■□□□□ 0.34
LRTM1Q9HBL6 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.17■□□□□ 0.34
LRTM1Q9HBL6 AC087499.1-201ENST00000418141 1075 ntBASIC17.17■□□□□ 0.34
LRTM1Q9HBL6 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.17■□□□□ 0.34
LRTM1Q9HBL6 RASA4DP-201ENST00000460726 1199 ntBASIC17.17■□□□□ 0.34
LRTM1Q9HBL6 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
LRTM1Q9HBL6 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.17■□□□□ 0.34
LRTM1Q9HBL6 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LRTM1Q9HBL6 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.17■□□□□ 0.34
LRTM1Q9HBL6 LINC00304-203ENST00000565008 1864 ntBASIC17.17■□□□□ 0.34
LRTM1Q9HBL6 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.17■□□□□ 0.34
LRTM1Q9HBL6 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.17■□□□□ 0.34
LRTM1Q9HBL6 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRTM1Q9HBL6 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRTM1Q9HBL6 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRTM1Q9HBL6 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRTM1Q9HBL6 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRTM1Q9HBL6 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
LRTM1Q9HBL6 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRTM1Q9HBL6 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
LRTM1Q9HBL6 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
LRTM1Q9HBL6 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRTM1Q9HBL6 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LRTM1Q9HBL6 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRTM1Q9HBL6 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.16■□□□□ 0.34
LRTM1Q9HBL6 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.16■□□□□ 0.34
LRTM1Q9HBL6 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
LRTM1Q9HBL6 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRTM1Q9HBL6 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LRTM1Q9HBL6 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRTM1Q9HBL6 SLC25A3P1-201ENST00000443844 931 ntBASIC17.16■□□□□ 0.34
LRTM1Q9HBL6 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
LRTM1Q9HBL6 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LRTM1Q9HBL6 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRTM1Q9HBL6 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.16■□□□□ 0.34
LRTM1Q9HBL6 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRTM1Q9HBL6 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRTM1Q9HBL6 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRTM1Q9HBL6 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRTM1Q9HBL6 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRTM1Q9HBL6 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRTM1Q9HBL6 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.15■□□□□ 0.34
LRTM1Q9HBL6 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRTM1Q9HBL6 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRTM1Q9HBL6 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRTM1Q9HBL6 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
LRTM1Q9HBL6 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRTM1Q9HBL6 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRTM1Q9HBL6 PRORSD1P-202ENST00000563365 2154 ntBASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms