Protein–RNA interactions for Protein: Q9HAZ1

CLK4, Dual specificity protein kinase CLK4, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4Q9HAZ1 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.4■□□□□ 0.38
CLK4Q9HAZ1 FGF14-AS2-201ENST00000606448 1074 ntBASIC17.4■□□□□ 0.38
CLK4Q9HAZ1 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLK4Q9HAZ1 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLK4Q9HAZ1 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLK4Q9HAZ1 AC108860.2-201ENST00000562760 2183 ntBASIC17.4■□□□□ 0.38
CLK4Q9HAZ1 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLK4Q9HAZ1 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.4■□□□□ 0.38
CLK4Q9HAZ1 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.4■□□□□ 0.38
CLK4Q9HAZ1 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.4■□□□□ 0.38
CLK4Q9HAZ1 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLK4Q9HAZ1 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLK4Q9HAZ1 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLK4Q9HAZ1 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLK4Q9HAZ1 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLK4Q9HAZ1 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLK4Q9HAZ1 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLK4Q9HAZ1 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLK4Q9HAZ1 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CLK4Q9HAZ1 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.39■□□□□ 0.38
CLK4Q9HAZ1 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
CLK4Q9HAZ1 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.39■□□□□ 0.38
CLK4Q9HAZ1 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.39■□□□□ 0.38
CLK4Q9HAZ1 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC17.39■□□□□ 0.37
CLK4Q9HAZ1 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.39■□□□□ 0.37
CLK4Q9HAZ1 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLK4Q9HAZ1 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLK4Q9HAZ1 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.39■□□□□ 0.37
CLK4Q9HAZ1 KRT89P-201ENST00000620027 1478 ntBASIC17.39■□□□□ 0.37
CLK4Q9HAZ1 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.39■□□□□ 0.37
CLK4Q9HAZ1 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLK4Q9HAZ1 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLK4Q9HAZ1 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLK4Q9HAZ1 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.39■□□□□ 0.37
CLK4Q9HAZ1 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLK4Q9HAZ1 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.39■□□□□ 0.37
CLK4Q9HAZ1 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.39■□□□□ 0.37
CLK4Q9HAZ1 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC17.39■□□□□ 0.37
CLK4Q9HAZ1 SPDYE15P-201ENST00000424157 909 ntBASIC17.39■□□□□ 0.37
CLK4Q9HAZ1 HLA-F-220ENST00000434407 884 ntBASIC17.39■□□□□ 0.37
CLK4Q9HAZ1 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.39■□□□□ 0.37
CLK4Q9HAZ1 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC17.39■□□□□ 0.37
CLK4Q9HAZ1 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLK4Q9HAZ1 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC17.39■□□□□ 0.37
CLK4Q9HAZ1 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC17.39■□□□□ 0.37
CLK4Q9HAZ1 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.39■□□□□ 0.37
CLK4Q9HAZ1 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLK4Q9HAZ1 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CLK4Q9HAZ1 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.39■□□□□ 0.37
CLK4Q9HAZ1 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLK4Q9HAZ1 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLK4Q9HAZ1 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CLK4Q9HAZ1 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CLK4Q9HAZ1 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CLK4Q9HAZ1 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.39■□□□□ 0.37
CLK4Q9HAZ1 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLK4Q9HAZ1 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CLK4Q9HAZ1 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.39■□□□□ 0.37
CLK4Q9HAZ1 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.39■□□□□ 0.37
CLK4Q9HAZ1 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLK4Q9HAZ1 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLK4Q9HAZ1 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLK4Q9HAZ1 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CLK4Q9HAZ1 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLK4Q9HAZ1 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CLK4Q9HAZ1 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLK4Q9HAZ1 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.38■□□□□ 0.37
CLK4Q9HAZ1 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.38■□□□□ 0.37
CLK4Q9HAZ1 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLK4Q9HAZ1 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLK4Q9HAZ1 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLK4Q9HAZ1 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLK4Q9HAZ1 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CLK4Q9HAZ1 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLK4Q9HAZ1 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLK4Q9HAZ1 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CLK4Q9HAZ1 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLK4Q9HAZ1 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLK4Q9HAZ1 COPE-203ENST00000351079 907 ntTSL 2 BASIC17.38■□□□□ 0.37
CLK4Q9HAZ1 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.38■□□□□ 0.37
CLK4Q9HAZ1 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC17.38■□□□□ 0.37
CLK4Q9HAZ1 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.38■□□□□ 0.37
CLK4Q9HAZ1 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLK4Q9HAZ1 AL136038.4-201ENST00000603606 1261 ntBASIC17.38■□□□□ 0.37
CLK4Q9HAZ1 AC010331.1-201ENST00000611423 582 ntBASIC17.38■□□□□ 0.37
CLK4Q9HAZ1 HYMAI.1-201ENST00000620949 238 ntBASIC17.38■□□□□ 0.37
CLK4Q9HAZ1 AL121956.5-201ENST00000625261 221 ntBASIC17.38■□□□□ 0.37
CLK4Q9HAZ1 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CLK4Q9HAZ1 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
CLK4Q9HAZ1 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CLK4Q9HAZ1 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLK4Q9HAZ1 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.38■□□□□ 0.37
CLK4Q9HAZ1 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLK4Q9HAZ1 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLK4Q9HAZ1 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CLK4Q9HAZ1 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CLK4Q9HAZ1 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CLK4Q9HAZ1 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLK4Q9HAZ1 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLK4Q9HAZ1 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms