Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
BRF2Q9HAW0 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
BRF2Q9HAW0 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
BRF2Q9HAW0 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.07■□□□□ 0.32
BRF2Q9HAW0 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
BRF2Q9HAW0 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
BRF2Q9HAW0 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.07■□□□□ 0.32
BRF2Q9HAW0 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.07■□□□□ 0.32
BRF2Q9HAW0 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
BRF2Q9HAW0 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
BRF2Q9HAW0 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
BRF2Q9HAW0 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
BRF2Q9HAW0 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
BRF2Q9HAW0 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.07■□□□□ 0.32
BRF2Q9HAW0 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
BRF2Q9HAW0 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.07■□□□□ 0.32
BRF2Q9HAW0 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
BRF2Q9HAW0 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
BRF2Q9HAW0 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.07■□□□□ 0.32
BRF2Q9HAW0 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
BRF2Q9HAW0 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.07■□□□□ 0.32
BRF2Q9HAW0 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
BRF2Q9HAW0 MTCL1P1-201ENST00000446207 792 ntBASIC17.07■□□□□ 0.32
BRF2Q9HAW0 AC068472.1-201ENST00000474589 881 ntBASIC17.07■□□□□ 0.32
BRF2Q9HAW0 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.07■□□□□ 0.32
BRF2Q9HAW0 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.07■□□□□ 0.32
BRF2Q9HAW0 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
BRF2Q9HAW0 AC022616.7-201ENST00000525383 220 ntBASIC17.07■□□□□ 0.32
BRF2Q9HAW0 AC005332.3-201ENST00000589904 676 ntBASIC17.07■□□□□ 0.32
BRF2Q9HAW0 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.07■□□□□ 0.32
BRF2Q9HAW0 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.07■□□□□ 0.32
BRF2Q9HAW0 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.07■□□□□ 0.32
BRF2Q9HAW0 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.07■□□□□ 0.32
BRF2Q9HAW0 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
BRF2Q9HAW0 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
BRF2Q9HAW0 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
BRF2Q9HAW0 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
BRF2Q9HAW0 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.07■□□□□ 0.32
BRF2Q9HAW0 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
BRF2Q9HAW0 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
BRF2Q9HAW0 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
BRF2Q9HAW0 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
BRF2Q9HAW0 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.07■□□□□ 0.32
BRF2Q9HAW0 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BRF2Q9HAW0 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
BRF2Q9HAW0 BX276092.7-203ENST00000637198 1536 ntBASIC17.06■□□□□ 0.32
BRF2Q9HAW0 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BRF2Q9HAW0 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BRF2Q9HAW0 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.06■□□□□ 0.32
BRF2Q9HAW0 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.06■□□□□ 0.32
BRF2Q9HAW0 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BRF2Q9HAW0 REXO1L11P-201ENST00000620964 1927 ntBASIC17.06■□□□□ 0.32
BRF2Q9HAW0 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.06■□□□□ 0.32
BRF2Q9HAW0 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BRF2Q9HAW0 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BRF2Q9HAW0 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
BRF2Q9HAW0 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BRF2Q9HAW0 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
BRF2Q9HAW0 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.06■□□□□ 0.32
BRF2Q9HAW0 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BRF2Q9HAW0 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
BRF2Q9HAW0 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BRF2Q9HAW0 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
BRF2Q9HAW0 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC17.06■□□□□ 0.32
BRF2Q9HAW0 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.06■□□□□ 0.32
BRF2Q9HAW0 AC083849.1-201ENST00000615227 514 ntBASIC17.06■□□□□ 0.32
BRF2Q9HAW0 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BRF2Q9HAW0 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
BRF2Q9HAW0 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
BRF2Q9HAW0 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.06■□□□□ 0.32
BRF2Q9HAW0 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
BRF2Q9HAW0 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
BRF2Q9HAW0 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
BRF2Q9HAW0 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
BRF2Q9HAW0 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
BRF2Q9HAW0 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
BRF2Q9HAW0 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
BRF2Q9HAW0 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
BRF2Q9HAW0 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.06■□□□□ 0.32
BRF2Q9HAW0 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.06■□□□□ 0.32
BRF2Q9HAW0 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
BRF2Q9HAW0 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.06■□□□□ 0.32
BRF2Q9HAW0 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
BRF2Q9HAW0 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.05■□□□□ 0.32
BRF2Q9HAW0 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
BRF2Q9HAW0 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BRF2Q9HAW0 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.05■□□□□ 0.32
BRF2Q9HAW0 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.05■□□□□ 0.32
BRF2Q9HAW0 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
BRF2Q9HAW0 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BRF2Q9HAW0 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BRF2Q9HAW0 RCN1P1-201ENST00000400413 996 ntBASIC17.05■□□□□ 0.32
BRF2Q9HAW0 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC17.05■□□□□ 0.32
BRF2Q9HAW0 SPDYE13P-201ENST00000445314 798 ntBASIC17.05■□□□□ 0.32
BRF2Q9HAW0 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.05■□□□□ 0.32
BRF2Q9HAW0 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.05■□□□□ 0.32
BRF2Q9HAW0 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC17.05■□□□□ 0.32
BRF2Q9HAW0 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC17.05■□□□□ 0.32
BRF2Q9HAW0 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC17.05■□□□□ 0.32
BRF2Q9HAW0 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms