Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
SCAF1Q9H7N4 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC26.59■■□□□ 1.85
SCAF1Q9H7N4 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
SCAF1Q9H7N4 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC26.59■■□□□ 1.85
SCAF1Q9H7N4 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
SCAF1Q9H7N4 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
SCAF1Q9H7N4 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC26.59■■□□□ 1.85
SCAF1Q9H7N4 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC26.59■■□□□ 1.85
SCAF1Q9H7N4 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC26.59■■□□□ 1.85
SCAF1Q9H7N4 ABALON-201ENST00000629058 1903 ntBASIC26.59■■□□□ 1.85
SCAF1Q9H7N4 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
SCAF1Q9H7N4 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC26.59■■□□□ 1.85
SCAF1Q9H7N4 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC26.59■■□□□ 1.85
SCAF1Q9H7N4 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
SCAF1Q9H7N4 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
SCAF1Q9H7N4 NUS1P2-201ENST00000417358 873 ntBASIC26.59■■□□□ 1.85
SCAF1Q9H7N4 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC26.59■■□□□ 1.85
SCAF1Q9H7N4 FRGCA-201ENST00000424933 422 ntTSL 3 BASIC26.59■■□□□ 1.85
SCAF1Q9H7N4 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC26.59■■□□□ 1.85
SCAF1Q9H7N4 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC26.59■■□□□ 1.85
SCAF1Q9H7N4 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
SCAF1Q9H7N4 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC26.59■■□□□ 1.85
SCAF1Q9H7N4 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC26.59■■□□□ 1.85
SCAF1Q9H7N4 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
SCAF1Q9H7N4 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC26.59■■□□□ 1.85
SCAF1Q9H7N4 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC26.58■■□□□ 1.85
SCAF1Q9H7N4 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
SCAF1Q9H7N4 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC26.58■■□□□ 1.85
SCAF1Q9H7N4 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC26.58■■□□□ 1.85
SCAF1Q9H7N4 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.85
SCAF1Q9H7N4 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC26.58■■□□□ 1.85
SCAF1Q9H7N4 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
SCAF1Q9H7N4 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC26.58■■□□□ 1.85
SCAF1Q9H7N4 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.85
SCAF1Q9H7N4 AC073592.3-201ENST00000625118 1834 ntBASIC26.58■■□□□ 1.85
SCAF1Q9H7N4 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC26.58■■□□□ 1.85
SCAF1Q9H7N4 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC26.58■■□□□ 1.85
SCAF1Q9H7N4 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC26.58■■□□□ 1.85
SCAF1Q9H7N4 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC26.58■■□□□ 1.85
SCAF1Q9H7N4 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC26.58■■□□□ 1.85
SCAF1Q9H7N4 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
SCAF1Q9H7N4 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
SCAF1Q9H7N4 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
SCAF1Q9H7N4 HES2-202ENST00000377836 507 ntTSL 2 BASIC26.58■■□□□ 1.85
SCAF1Q9H7N4 LSM5-204ENST00000409909 740 ntTSL 2 BASIC26.58■■□□□ 1.85
SCAF1Q9H7N4 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
SCAF1Q9H7N4 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC26.58■■□□□ 1.85
SCAF1Q9H7N4 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC26.58■■□□□ 1.85
SCAF1Q9H7N4 AL645608.8-201ENST00000606034 2086 ntBASIC26.58■■□□□ 1.85
SCAF1Q9H7N4 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.84
SCAF1Q9H7N4 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC26.57■■□□□ 1.84
SCAF1Q9H7N4 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC26.57■■□□□ 1.84
SCAF1Q9H7N4 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
SCAF1Q9H7N4 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC26.57■■□□□ 1.84
SCAF1Q9H7N4 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
SCAF1Q9H7N4 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
SCAF1Q9H7N4 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
SCAF1Q9H7N4 AP001271.2-201ENST00000624018 1556 ntBASIC26.57■■□□□ 1.84
SCAF1Q9H7N4 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
SCAF1Q9H7N4 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
SCAF1Q9H7N4 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
SCAF1Q9H7N4 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
SCAF1Q9H7N4 HLA-J-203ENST00000494367 1087 ntBASIC26.57■■□□□ 1.84
SCAF1Q9H7N4 AP002336.2-201ENST00000528607 539 ntTSL 5 BASIC26.57■■□□□ 1.84
SCAF1Q9H7N4 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC26.57■■□□□ 1.84
SCAF1Q9H7N4 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC26.57■■□□□ 1.84
SCAF1Q9H7N4 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC26.57■■□□□ 1.84
SCAF1Q9H7N4 CAND2-206ENST00000626378 333 ntTSL 5 BASIC26.57■■□□□ 1.84
SCAF1Q9H7N4 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC26.57■■□□□ 1.84
SCAF1Q9H7N4 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC26.57■■□□□ 1.84
SCAF1Q9H7N4 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC26.57■■□□□ 1.84
SCAF1Q9H7N4 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
SCAF1Q9H7N4 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
SCAF1Q9H7N4 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
SCAF1Q9H7N4 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
SCAF1Q9H7N4 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
SCAF1Q9H7N4 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
SCAF1Q9H7N4 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC26.56■■□□□ 1.84
SCAF1Q9H7N4 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC26.56■■□□□ 1.84
SCAF1Q9H7N4 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
SCAF1Q9H7N4 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC26.56■■□□□ 1.84
SCAF1Q9H7N4 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC26.56■■□□□ 1.84
SCAF1Q9H7N4 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC26.56■■□□□ 1.84
SCAF1Q9H7N4 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC26.56■■□□□ 1.84
SCAF1Q9H7N4 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
SCAF1Q9H7N4 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC26.56■■□□□ 1.84
SCAF1Q9H7N4 DHDH-204ENST00000523250 634 ntTSL 5 BASIC26.56■■□□□ 1.84
SCAF1Q9H7N4 FICD-205ENST00000552758 603 ntTSL 2 BASIC26.56■■□□□ 1.84
SCAF1Q9H7N4 AL451064.1-201ENST00000607718 471 ntBASIC26.56■■□□□ 1.84
SCAF1Q9H7N4 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
SCAF1Q9H7N4 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC26.56■■□□□ 1.84
SCAF1Q9H7N4 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC26.56■■□□□ 1.84
SCAF1Q9H7N4 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC26.56■■□□□ 1.84
SCAF1Q9H7N4 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
SCAF1Q9H7N4 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC26.56■■□□□ 1.84
SCAF1Q9H7N4 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
SCAF1Q9H7N4 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
SCAF1Q9H7N4 UBC-206ENST00000538617 1303 ntTSL 5 BASIC26.56■■□□□ 1.84
SCAF1Q9H7N4 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC26.56■■□□□ 1.84
SCAF1Q9H7N4 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms