Protein–RNA interactions for Protein: Q9H094

NBPF3, Neuroblastoma breakpoint family member 3, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3Q9H094 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
NBPF3Q9H094 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC21.14■□□□□ 0.98
NBPF3Q9H094 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC21.14■□□□□ 0.98
NBPF3Q9H094 MED29-202ENST00000594368 1471 ntTSL 2 BASIC21.14■□□□□ 0.98
NBPF3Q9H094 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
NBPF3Q9H094 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NBPF3Q9H094 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC21.14■□□□□ 0.97
NBPF3Q9H094 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
NBPF3Q9H094 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
NBPF3Q9H094 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
NBPF3Q9H094 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
NBPF3Q9H094 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
NBPF3Q9H094 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NBPF3Q9H094 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
NBPF3Q9H094 AC096633.1-201ENST00000422446 749 ntBASIC21.14■□□□□ 0.97
NBPF3Q9H094 KRT16P4-201ENST00000453883 522 ntBASIC21.14■□□□□ 0.97
NBPF3Q9H094 AC104819.1-201ENST00000504587 486 ntBASIC21.14■□□□□ 0.97
NBPF3Q9H094 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC21.14■□□□□ 0.97
NBPF3Q9H094 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NBPF3Q9H094 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC21.14■□□□□ 0.97
NBPF3Q9H094 MNT-208ENST00000575394 606 ntTSL 4 BASIC21.14■□□□□ 0.97
NBPF3Q9H094 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
NBPF3Q9H094 VPS51-217ENST00000639871 243 ntTSL 5 BASIC21.14■□□□□ 0.97
NBPF3Q9H094 AC068880.1-201ENST00000507289 2297 ntBASIC21.14■□□□□ 0.97
NBPF3Q9H094 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NBPF3Q9H094 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC21.14■□□□□ 0.97
NBPF3Q9H094 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC21.14■□□□□ 0.97
NBPF3Q9H094 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
NBPF3Q9H094 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC21.14■□□□□ 0.97
NBPF3Q9H094 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NBPF3Q9H094 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
NBPF3Q9H094 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC21.14■□□□□ 0.97
NBPF3Q9H094 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC21.14■□□□□ 0.97
NBPF3Q9H094 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
NBPF3Q9H094 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC21.14■□□□□ 0.97
NBPF3Q9H094 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC21.14■□□□□ 0.97
NBPF3Q9H094 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC21.14■□□□□ 0.97
NBPF3Q9H094 AC067852.2-201ENST00000590513 2313 ntBASIC21.13■□□□□ 0.97
NBPF3Q9H094 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
NBPF3Q9H094 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC21.13■□□□□ 0.97
NBPF3Q9H094 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
NBPF3Q9H094 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC21.13■□□□□ 0.97
NBPF3Q9H094 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC21.13■□□□□ 0.97
NBPF3Q9H094 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
NBPF3Q9H094 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
NBPF3Q9H094 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
NBPF3Q9H094 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NBPF3Q9H094 DFFB-203ENST00000341385 572 ntTSL 5 BASIC21.13■□□□□ 0.97
NBPF3Q9H094 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC21.13■□□□□ 0.97
NBPF3Q9H094 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
NBPF3Q9H094 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC21.13■□□□□ 0.97
NBPF3Q9H094 AC007967.3-201ENST00000434308 558 ntBASIC21.13■□□□□ 0.97
NBPF3Q9H094 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC21.13■□□□□ 0.97
NBPF3Q9H094 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC21.13■□□□□ 0.97
NBPF3Q9H094 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC21.13■□□□□ 0.97
NBPF3Q9H094 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
NBPF3Q9H094 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC21.13■□□□□ 0.97
NBPF3Q9H094 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC21.13■□□□□ 0.97
NBPF3Q9H094 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC21.13■□□□□ 0.97
NBPF3Q9H094 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
NBPF3Q9H094 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
NBPF3Q9H094 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
NBPF3Q9H094 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NBPF3Q9H094 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
NBPF3Q9H094 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
NBPF3Q9H094 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
NBPF3Q9H094 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NBPF3Q9H094 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NBPF3Q9H094 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NBPF3Q9H094 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
NBPF3Q9H094 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
NBPF3Q9H094 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
NBPF3Q9H094 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
NBPF3Q9H094 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NBPF3Q9H094 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
NBPF3Q9H094 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC21.12■□□□□ 0.97
NBPF3Q9H094 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NBPF3Q9H094 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
NBPF3Q9H094 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC21.12■□□□□ 0.97
NBPF3Q9H094 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
NBPF3Q9H094 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
NBPF3Q9H094 AC099336.1-202ENST00000602961 463 ntBASIC21.12■□□□□ 0.97
NBPF3Q9H094 NME4-212ENST00000621774 904 ntTSL 3 BASIC21.12■□□□□ 0.97
NBPF3Q9H094 AF228730.7-201ENST00000641842 219 ntBASIC21.12■□□□□ 0.97
NBPF3Q9H094 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC21.12■□□□□ 0.97
NBPF3Q9H094 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
NBPF3Q9H094 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
NBPF3Q9H094 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
NBPF3Q9H094 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC21.12■□□□□ 0.97
NBPF3Q9H094 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC21.12■□□□□ 0.97
NBPF3Q9H094 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
NBPF3Q9H094 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NBPF3Q9H094 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC21.11■□□□□ 0.97
NBPF3Q9H094 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
NBPF3Q9H094 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
NBPF3Q9H094 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
NBPF3Q9H094 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC21.11■□□□□ 0.97
NBPF3Q9H094 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
NBPF3Q9H094 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC21.11■□□□□ 0.97
NBPF3Q9H094 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms