Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CNTNAP3Q9BZ76 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.95■□□□□ 0.3
CNTNAP3Q9BZ76 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CNTNAP3Q9BZ76 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.95■□□□□ 0.3
CNTNAP3Q9BZ76 AC108073.2-201ENST00000464002 357 ntBASIC16.95■□□□□ 0.3
CNTNAP3Q9BZ76 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.95■□□□□ 0.3
CNTNAP3Q9BZ76 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC16.95■□□□□ 0.3
CNTNAP3Q9BZ76 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC16.95■□□□□ 0.3
CNTNAP3Q9BZ76 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CNTNAP3Q9BZ76 AL662799.1-202ENST00000614205 422 ntBASIC16.95■□□□□ 0.3
CNTNAP3Q9BZ76 AL022326.1-202ENST00000641533 845 ntBASIC16.95■□□□□ 0.3
CNTNAP3Q9BZ76 GOLGA6L5P-202ENST00000515341 1828 ntBASIC16.95■□□□□ 0.3
CNTNAP3Q9BZ76 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNTNAP3Q9BZ76 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNTNAP3Q9BZ76 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CNTNAP3Q9BZ76 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNTNAP3Q9BZ76 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
CNTNAP3Q9BZ76 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CNTNAP3Q9BZ76 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNTNAP3Q9BZ76 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CNTNAP3Q9BZ76 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC16.95■□□□□ 0.3
CNTNAP3Q9BZ76 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC16.95■□□□□ 0.3
CNTNAP3Q9BZ76 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNTNAP3Q9BZ76 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNTNAP3Q9BZ76 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.95■□□□□ 0.3
CNTNAP3Q9BZ76 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC16.95■□□□□ 0.3
CNTNAP3Q9BZ76 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CNTNAP3Q9BZ76 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CNTNAP3Q9BZ76 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
CNTNAP3Q9BZ76 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CNTNAP3Q9BZ76 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CNTNAP3Q9BZ76 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CNTNAP3Q9BZ76 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CNTNAP3Q9BZ76 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CNTNAP3Q9BZ76 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CNTNAP3Q9BZ76 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.94■□□□□ 0.3
CNTNAP3Q9BZ76 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CNTNAP3Q9BZ76 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CNTNAP3Q9BZ76 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
CNTNAP3Q9BZ76 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CNTNAP3Q9BZ76 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CNTNAP3Q9BZ76 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CNTNAP3Q9BZ76 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CNTNAP3Q9BZ76 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC16.94■□□□□ 0.3
CNTNAP3Q9BZ76 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC16.94■□□□□ 0.3
CNTNAP3Q9BZ76 HILS1-202ENST00000545329 423 ntBASIC16.94■□□□□ 0.3
CNTNAP3Q9BZ76 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.94■□□□□ 0.3
CNTNAP3Q9BZ76 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CNTNAP3Q9BZ76 RETN-203ENST00000629642 400 ntTSL 5 BASIC16.94■□□□□ 0.3
CNTNAP3Q9BZ76 AC068587.10-201ENST00000641210 219 ntBASIC16.94■□□□□ 0.3
CNTNAP3Q9BZ76 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CNTNAP3Q9BZ76 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CNTNAP3Q9BZ76 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CNTNAP3Q9BZ76 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.94■□□□□ 0.3
CNTNAP3Q9BZ76 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.94■□□□□ 0.3
CNTNAP3Q9BZ76 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CNTNAP3Q9BZ76 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CNTNAP3Q9BZ76 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CNTNAP3Q9BZ76 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CNTNAP3Q9BZ76 BCAR1-209ENST00000546196 1340 ntBASIC16.94■□□□□ 0.3
CNTNAP3Q9BZ76 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
CNTNAP3Q9BZ76 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CNTNAP3Q9BZ76 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CNTNAP3Q9BZ76 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
CNTNAP3Q9BZ76 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CNTNAP3Q9BZ76 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CNTNAP3Q9BZ76 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC16.93■□□□□ 0.3
CNTNAP3Q9BZ76 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CNTNAP3Q9BZ76 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC16.93■□□□□ 0.3
CNTNAP3Q9BZ76 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC16.93■□□□□ 0.3
CNTNAP3Q9BZ76 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CNTNAP3Q9BZ76 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CNTNAP3Q9BZ76 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC16.93■□□□□ 0.3
CNTNAP3Q9BZ76 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.93■□□□□ 0.3
CNTNAP3Q9BZ76 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
CNTNAP3Q9BZ76 CNN2P2-201ENST00000443536 909 ntBASIC16.93■□□□□ 0.3
CNTNAP3Q9BZ76 CNN2P3-201ENST00000450201 906 ntBASIC16.93■□□□□ 0.3
CNTNAP3Q9BZ76 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.93■□□□□ 0.3
CNTNAP3Q9BZ76 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC16.93■□□□□ 0.3
CNTNAP3Q9BZ76 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CNTNAP3Q9BZ76 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.93■□□□□ 0.3
CNTNAP3Q9BZ76 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.93■□□□□ 0.3
CNTNAP3Q9BZ76 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CNTNAP3Q9BZ76 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.93■□□□□ 0.3
CNTNAP3Q9BZ76 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC16.93■□□□□ 0.3
CNTNAP3Q9BZ76 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC16.93■□□□□ 0.3
CNTNAP3Q9BZ76 AL136317.3-201ENST00000618497 906 ntBASIC16.93■□□□□ 0.3
CNTNAP3Q9BZ76 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CNTNAP3Q9BZ76 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
CNTNAP3Q9BZ76 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CNTNAP3Q9BZ76 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CNTNAP3Q9BZ76 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC16.93■□□□□ 0.3
CNTNAP3Q9BZ76 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CNTNAP3Q9BZ76 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CNTNAP3Q9BZ76 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CNTNAP3Q9BZ76 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.93■□□□□ 0.3
CNTNAP3Q9BZ76 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.93■□□□□ 0.3
CNTNAP3Q9BZ76 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CNTNAP3Q9BZ76 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
CNTNAP3Q9BZ76 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms