Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 AL139353.2-202ENST00000502430 1213 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
KRTAP3-1Q9BYR8 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC9.06□□□□□ -0.96
KRTAP3-1Q9BYR8 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC9.06□□□□□ -0.96
KRTAP3-1Q9BYR8 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC9.06□□□□□ -0.96
KRTAP3-1Q9BYR8 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC9.06□□□□□ -0.96
KRTAP3-1Q9BYR8 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC9.06□□□□□ -0.96
KRTAP3-1Q9BYR8 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC9.06□□□□□ -0.96
KRTAP3-1Q9BYR8 REEP1-209ENST00000541910 969 ntTSL 2 BASIC9.06□□□□□ -0.96
KRTAP3-1Q9BYR8 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC9.06□□□□□ -0.96
KRTAP3-1Q9BYR8 AC009065.1-201ENST00000564055 1225 ntBASIC9.06□□□□□ -0.96
KRTAP3-1Q9BYR8 CYGB-204ENST00000589342 815 ntTSL 3 BASIC9.06□□□□□ -0.96
KRTAP3-1Q9BYR8 SPIB-206ENST00000596074 847 ntTSL 2 BASIC9.06□□□□□ -0.96
KRTAP3-1Q9BYR8 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC9.06□□□□□ -0.96
KRTAP3-1Q9BYR8 AC010240.3-201ENST00000607688 395 ntBASIC9.06□□□□□ -0.96
KRTAP3-1Q9BYR8 AL391262.2-201ENST00000622466 494 ntBASIC9.06□□□□□ -0.96
KRTAP3-1Q9BYR8 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
KRTAP3-1Q9BYR8 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
KRTAP3-1Q9BYR8 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC9.06□□□□□ -0.96
KRTAP3-1Q9BYR8 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
KRTAP3-1Q9BYR8 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
KRTAP3-1Q9BYR8 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
KRTAP3-1Q9BYR8 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC9.06□□□□□ -0.96
KRTAP3-1Q9BYR8 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
KRTAP3-1Q9BYR8 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC9.06□□□□□ -0.96
KRTAP3-1Q9BYR8 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC9.06□□□□□ -0.96
KRTAP3-1Q9BYR8 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
KRTAP3-1Q9BYR8 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC9.06□□□□□ -0.96
KRTAP3-1Q9BYR8 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
KRTAP3-1Q9BYR8 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
KRTAP3-1Q9BYR8 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
KRTAP3-1Q9BYR8 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC9.06□□□□□ -0.96
KRTAP3-1Q9BYR8 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC9.06□□□□□ -0.96
KRTAP3-1Q9BYR8 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC9.06□□□□□ -0.96
KRTAP3-1Q9BYR8 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
KRTAP3-1Q9BYR8 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC9.05□□□□□ -0.96
KRTAP3-1Q9BYR8 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC9.05□□□□□ -0.96
KRTAP3-1Q9BYR8 AC022898.2-201ENST00000616822 1312 ntBASIC9.05□□□□□ -0.96
KRTAP3-1Q9BYR8 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC9.05□□□□□ -0.96
KRTAP3-1Q9BYR8 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
KRTAP3-1Q9BYR8 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC9.05□□□□□ -0.96
KRTAP3-1Q9BYR8 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
KRTAP3-1Q9BYR8 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
KRTAP3-1Q9BYR8 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
KRTAP3-1Q9BYR8 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC9.05□□□□□ -0.96
KRTAP3-1Q9BYR8 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
KRTAP3-1Q9BYR8 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
KRTAP3-1Q9BYR8 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
KRTAP3-1Q9BYR8 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
KRTAP3-1Q9BYR8 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
KRTAP3-1Q9BYR8 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC9.05□□□□□ -0.96
KRTAP3-1Q9BYR8 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
KRTAP3-1Q9BYR8 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
KRTAP3-1Q9BYR8 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC9.05□□□□□ -0.96
KRTAP3-1Q9BYR8 AC046158.3-201ENST00000624947 2558 ntBASIC9.05□□□□□ -0.96
KRTAP3-1Q9BYR8 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
KRTAP3-1Q9BYR8 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC9.05□□□□□ -0.96
KRTAP3-1Q9BYR8 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC9.05□□□□□ -0.96
KRTAP3-1Q9BYR8 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
KRTAP3-1Q9BYR8 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
KRTAP3-1Q9BYR8 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
KRTAP3-1Q9BYR8 LRRIQ3-203ENST00000370911 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
KRTAP3-1Q9BYR8 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
KRTAP3-1Q9BYR8 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC9.05□□□□□ -0.96
KRTAP3-1Q9BYR8 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
KRTAP3-1Q9BYR8 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
KRTAP3-1Q9BYR8 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
KRTAP3-1Q9BYR8 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC9.05□□□□□ -0.96
KRTAP3-1Q9BYR8 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
KRTAP3-1Q9BYR8 LRRIQ3-202ENST00000370909 793 ntTSL 5 BASIC9.05□□□□□ -0.96
KRTAP3-1Q9BYR8 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC9.05□□□□□ -0.96
KRTAP3-1Q9BYR8 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
KRTAP3-1Q9BYR8 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC9.05□□□□□ -0.96
KRTAP3-1Q9BYR8 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC9.05□□□□□ -0.96
KRTAP3-1Q9BYR8 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC9.05□□□□□ -0.96
KRTAP3-1Q9BYR8 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC9.05□□□□□ -0.96
KRTAP3-1Q9BYR8 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC9.05□□□□□ -0.96
KRTAP3-1Q9BYR8 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC9.05□□□□□ -0.96
KRTAP3-1Q9BYR8 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC9.05□□□□□ -0.96
KRTAP3-1Q9BYR8 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC9.05□□□□□ -0.96
KRTAP3-1Q9BYR8 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC9.05□□□□□ -0.96
KRTAP3-1Q9BYR8 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC9.05□□□□□ -0.96
KRTAP3-1Q9BYR8 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC9.05□□□□□ -0.96
KRTAP3-1Q9BYR8 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC9.05□□□□□ -0.96
KRTAP3-1Q9BYR8 AC022558.1-201ENST00000560450 454 ntTSL 3 BASIC9.05□□□□□ -0.96
KRTAP3-1Q9BYR8 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC9.05□□□□□ -0.96
KRTAP3-1Q9BYR8 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC9.05□□□□□ -0.96
KRTAP3-1Q9BYR8 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC9.05□□□□□ -0.96
KRTAP3-1Q9BYR8 MIR4651-201ENST00000582622 73 ntBASIC9.05□□□□□ -0.96
KRTAP3-1Q9BYR8 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC9.05□□□□□ -0.96
KRTAP3-1Q9BYR8 AL109620.1-201ENST00000618738 1197 ntBASIC9.05□□□□□ -0.96
KRTAP3-1Q9BYR8 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
KRTAP3-1Q9BYR8 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
KRTAP3-1Q9BYR8 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC9.05□□□□□ -0.96
KRTAP3-1Q9BYR8 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
KRTAP3-1Q9BYR8 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC9.05□□□□□ -0.96
KRTAP3-1Q9BYR8 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC9.05□□□□□ -0.96
KRTAP3-1Q9BYR8 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC9.05□□□□□ -0.96
KRTAP3-1Q9BYR8 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC9.05□□□□□ -0.96
KRTAP3-1Q9BYR8 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
KRTAP3-1Q9BYR8 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms