Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SSBP4Q9BWG4 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
SSBP4Q9BWG4 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SSBP4Q9BWG4 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
SSBP4Q9BWG4 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SSBP4Q9BWG4 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
SSBP4Q9BWG4 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC13.52□□□□□ -0.24
SSBP4Q9BWG4 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SSBP4Q9BWG4 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
SSBP4Q9BWG4 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC13.52□□□□□ -0.24
SSBP4Q9BWG4 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
SSBP4Q9BWG4 AL355312.1-201ENST00000407115 2176 ntBASIC13.52□□□□□ -0.24
SSBP4Q9BWG4 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SSBP4Q9BWG4 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
SSBP4Q9BWG4 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
SSBP4Q9BWG4 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SSBP4Q9BWG4 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SSBP4Q9BWG4 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SSBP4Q9BWG4 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SSBP4Q9BWG4 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SSBP4Q9BWG4 CFL2-205ENST00000555765 632 ntTSL 2 BASIC13.52□□□□□ -0.25
SSBP4Q9BWG4 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC13.52□□□□□ -0.25
SSBP4Q9BWG4 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC13.52□□□□□ -0.25
SSBP4Q9BWG4 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
SSBP4Q9BWG4 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC13.52□□□□□ -0.25
SSBP4Q9BWG4 WT1-AS_3.1-201ENST00000613262 234 ntBASIC13.52□□□□□ -0.25
SSBP4Q9BWG4 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
SSBP4Q9BWG4 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SSBP4Q9BWG4 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC13.52□□□□□ -0.25
SSBP4Q9BWG4 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SSBP4Q9BWG4 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
SSBP4Q9BWG4 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
SSBP4Q9BWG4 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC13.52□□□□□ -0.25
SSBP4Q9BWG4 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SSBP4Q9BWG4 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SSBP4Q9BWG4 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SSBP4Q9BWG4 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC13.52□□□□□ -0.25
SSBP4Q9BWG4 CA12-203ENST00000422263 2556 ntTSL 2 BASIC13.52□□□□□ -0.25
SSBP4Q9BWG4 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
SSBP4Q9BWG4 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
SSBP4Q9BWG4 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
SSBP4Q9BWG4 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SSBP4Q9BWG4 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SSBP4Q9BWG4 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
SSBP4Q9BWG4 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SSBP4Q9BWG4 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SSBP4Q9BWG4 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SSBP4Q9BWG4 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
SSBP4Q9BWG4 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SSBP4Q9BWG4 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC13.51□□□□□ -0.25
SSBP4Q9BWG4 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SSBP4Q9BWG4 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SSBP4Q9BWG4 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
SSBP4Q9BWG4 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
SSBP4Q9BWG4 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
SSBP4Q9BWG4 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SSBP4Q9BWG4 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
SSBP4Q9BWG4 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SSBP4Q9BWG4 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC13.51□□□□□ -0.25
SSBP4Q9BWG4 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
SSBP4Q9BWG4 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SSBP4Q9BWG4 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
SSBP4Q9BWG4 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SSBP4Q9BWG4 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SSBP4Q9BWG4 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SSBP4Q9BWG4 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC13.51□□□□□ -0.25
SSBP4Q9BWG4 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC13.51□□□□□ -0.25
SSBP4Q9BWG4 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC13.51□□□□□ -0.25
SSBP4Q9BWG4 PHGDH-209ENST00000641074 1780 ntBASIC13.51□□□□□ -0.25
SSBP4Q9BWG4 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC13.51□□□□□ -0.25
SSBP4Q9BWG4 AL109659.2-201ENST00000606809 1674 ntBASIC13.51□□□□□ -0.25
SSBP4Q9BWG4 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SSBP4Q9BWG4 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC13.51□□□□□ -0.25
SSBP4Q9BWG4 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC13.51□□□□□ -0.25
SSBP4Q9BWG4 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SSBP4Q9BWG4 AP000593.1-201ENST00000393668 712 ntBASIC13.51□□□□□ -0.25
SSBP4Q9BWG4 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC13.51□□□□□ -0.25
SSBP4Q9BWG4 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SSBP4Q9BWG4 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC13.51□□□□□ -0.25
SSBP4Q9BWG4 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC13.51□□□□□ -0.25
SSBP4Q9BWG4 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SSBP4Q9BWG4 RN7SL602P-201ENST00000578326 324 ntBASIC13.51□□□□□ -0.25
SSBP4Q9BWG4 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC13.51□□□□□ -0.25
SSBP4Q9BWG4 AC131212.4-201ENST00000623606 975 ntBASIC13.51□□□□□ -0.25
SSBP4Q9BWG4 AC133041.1-202ENST00000642053 222 ntBASIC13.51□□□□□ -0.25
SSBP4Q9BWG4 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
SSBP4Q9BWG4 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SSBP4Q9BWG4 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC13.51□□□□□ -0.25
SSBP4Q9BWG4 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
SSBP4Q9BWG4 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SSBP4Q9BWG4 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
SSBP4Q9BWG4 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SSBP4Q9BWG4 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC13.51□□□□□ -0.25
SSBP4Q9BWG4 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
SSBP4Q9BWG4 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
SSBP4Q9BWG4 ANKRD26P3-201ENST00000454044 2748 ntBASIC13.51□□□□□ -0.25
SSBP4Q9BWG4 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC13.51□□□□□ -0.25
SSBP4Q9BWG4 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
SSBP4Q9BWG4 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
SSBP4Q9BWG4 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms