Protein–RNA interactions for Protein: Q9BRF8

CPPED1, Serine/threonine-protein phosphatase CPPED1, humanhuman

Predicted RBP Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPPED1Q9BRF8 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CPPED1Q9BRF8 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPPED1Q9BRF8 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPPED1Q9BRF8 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CPPED1Q9BRF8 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPPED1Q9BRF8 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPPED1Q9BRF8 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CPPED1Q9BRF8 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CPPED1Q9BRF8 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPPED1Q9BRF8 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.78■□□□□ 0.28
CPPED1Q9BRF8 KRT18P65-201ENST00000439811 1286 ntBASIC16.78■□□□□ 0.28
CPPED1Q9BRF8 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC16.78■□□□□ 0.28
CPPED1Q9BRF8 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
CPPED1Q9BRF8 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC16.78■□□□□ 0.28
CPPED1Q9BRF8 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC16.78■□□□□ 0.28
CPPED1Q9BRF8 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC16.78■□□□□ 0.28
CPPED1Q9BRF8 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CPPED1Q9BRF8 USF2-205ENST00000594064 1179 ntTSL 2 BASIC16.78■□□□□ 0.28
CPPED1Q9BRF8 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPPED1Q9BRF8 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CPPED1Q9BRF8 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPPED1Q9BRF8 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.78■□□□□ 0.28
CPPED1Q9BRF8 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CPPED1Q9BRF8 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPPED1Q9BRF8 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPPED1Q9BRF8 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
CPPED1Q9BRF8 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CPPED1Q9BRF8 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC16.78■□□□□ 0.28
CPPED1Q9BRF8 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.78■□□□□ 0.28
CPPED1Q9BRF8 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPPED1Q9BRF8 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CPPED1Q9BRF8 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CPPED1Q9BRF8 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CPPED1Q9BRF8 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CPPED1Q9BRF8 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.77■□□□□ 0.28
CPPED1Q9BRF8 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.77■□□□□ 0.28
CPPED1Q9BRF8 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CPPED1Q9BRF8 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
CPPED1Q9BRF8 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CPPED1Q9BRF8 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.77■□□□□ 0.28
CPPED1Q9BRF8 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CPPED1Q9BRF8 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.77■□□□□ 0.28
CPPED1Q9BRF8 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.77■□□□□ 0.28
CPPED1Q9BRF8 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CPPED1Q9BRF8 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.77■□□□□ 0.28
CPPED1Q9BRF8 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC16.77■□□□□ 0.28
CPPED1Q9BRF8 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC16.77■□□□□ 0.28
CPPED1Q9BRF8 SNORA78-201ENST00000459373 127 ntBASIC16.77■□□□□ 0.28
CPPED1Q9BRF8 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC16.77■□□□□ 0.28
CPPED1Q9BRF8 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC16.77■□□□□ 0.28
CPPED1Q9BRF8 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.77■□□□□ 0.28
CPPED1Q9BRF8 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.77■□□□□ 0.28
CPPED1Q9BRF8 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CPPED1Q9BRF8 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CPPED1Q9BRF8 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CPPED1Q9BRF8 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.77■□□□□ 0.27
CPPED1Q9BRF8 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CPPED1Q9BRF8 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CPPED1Q9BRF8 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
CPPED1Q9BRF8 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CPPED1Q9BRF8 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CPPED1Q9BRF8 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
CPPED1Q9BRF8 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CPPED1Q9BRF8 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CPPED1Q9BRF8 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.76■□□□□ 0.27
CPPED1Q9BRF8 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CPPED1Q9BRF8 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CPPED1Q9BRF8 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.76■□□□□ 0.27
CPPED1Q9BRF8 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CPPED1Q9BRF8 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CPPED1Q9BRF8 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CPPED1Q9BRF8 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
CPPED1Q9BRF8 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CPPED1Q9BRF8 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CPPED1Q9BRF8 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.76■□□□□ 0.27
CPPED1Q9BRF8 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC16.76■□□□□ 0.27
CPPED1Q9BRF8 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC16.76■□□□□ 0.27
CPPED1Q9BRF8 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.76■□□□□ 0.27
CPPED1Q9BRF8 AL512604.3-201ENST00000569583 964 ntBASIC16.76■□□□□ 0.27
CPPED1Q9BRF8 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC16.76■□□□□ 0.27
CPPED1Q9BRF8 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.76■□□□□ 0.27
CPPED1Q9BRF8 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CPPED1Q9BRF8 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CPPED1Q9BRF8 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CPPED1Q9BRF8 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.76■□□□□ 0.27
CPPED1Q9BRF8 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CPPED1Q9BRF8 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CPPED1Q9BRF8 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
CPPED1Q9BRF8 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CPPED1Q9BRF8 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CPPED1Q9BRF8 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CPPED1Q9BRF8 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.76■□□□□ 0.27
CPPED1Q9BRF8 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
CPPED1Q9BRF8 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CPPED1Q9BRF8 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CPPED1Q9BRF8 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
CPPED1Q9BRF8 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CPPED1Q9BRF8 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CPPED1Q9BRF8 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CPPED1Q9BRF8 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms