Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
EBF4Q9BQW3 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
EBF4Q9BQW3 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
EBF4Q9BQW3 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.39■□□□□ 0.37
EBF4Q9BQW3 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
EBF4Q9BQW3 CICP6-201ENST00000457191 2729 ntBASIC17.39■□□□□ 0.37
EBF4Q9BQW3 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.39■□□□□ 0.37
EBF4Q9BQW3 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
EBF4Q9BQW3 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
EBF4Q9BQW3 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
EBF4Q9BQW3 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
EBF4Q9BQW3 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
EBF4Q9BQW3 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
EBF4Q9BQW3 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
EBF4Q9BQW3 CRYGFP-201ENST00000418459 633 ntBASIC17.39■□□□□ 0.37
EBF4Q9BQW3 AP003041.3-201ENST00000527151 707 ntBASIC17.39■□□□□ 0.37
EBF4Q9BQW3 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.39■□□□□ 0.37
EBF4Q9BQW3 WWOX-216ENST00000569818 525 ntBASIC17.39■□□□□ 0.37
EBF4Q9BQW3 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.39■□□□□ 0.37
EBF4Q9BQW3 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
EBF4Q9BQW3 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
EBF4Q9BQW3 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
EBF4Q9BQW3 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
EBF4Q9BQW3 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
EBF4Q9BQW3 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
EBF4Q9BQW3 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
EBF4Q9BQW3 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.39■□□□□ 0.37
EBF4Q9BQW3 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
EBF4Q9BQW3 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
EBF4Q9BQW3 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
EBF4Q9BQW3 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
EBF4Q9BQW3 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.39■□□□□ 0.37
EBF4Q9BQW3 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
EBF4Q9BQW3 LINC00167-201ENST00000530583 1419 ntBASIC17.38■□□□□ 0.37
EBF4Q9BQW3 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
EBF4Q9BQW3 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
EBF4Q9BQW3 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.38■□□□□ 0.37
EBF4Q9BQW3 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
EBF4Q9BQW3 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
EBF4Q9BQW3 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
EBF4Q9BQW3 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
EBF4Q9BQW3 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
EBF4Q9BQW3 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
EBF4Q9BQW3 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
EBF4Q9BQW3 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
EBF4Q9BQW3 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
EBF4Q9BQW3 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
EBF4Q9BQW3 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
EBF4Q9BQW3 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
EBF4Q9BQW3 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
EBF4Q9BQW3 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
EBF4Q9BQW3 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
EBF4Q9BQW3 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.38■□□□□ 0.37
EBF4Q9BQW3 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.38■□□□□ 0.37
EBF4Q9BQW3 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.38■□□□□ 0.37
EBF4Q9BQW3 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.38■□□□□ 0.37
EBF4Q9BQW3 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.38■□□□□ 0.37
EBF4Q9BQW3 EMC9-206ENST00000560403 872 ntTSL 2 BASIC17.38■□□□□ 0.37
EBF4Q9BQW3 MIR3180-4-201ENST00000582223 153 ntBASIC17.38■□□□□ 0.37
EBF4Q9BQW3 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.38■□□□□ 0.37
EBF4Q9BQW3 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC17.38■□□□□ 0.37
EBF4Q9BQW3 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.38■□□□□ 0.37
EBF4Q9BQW3 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.38■□□□□ 0.37
EBF4Q9BQW3 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
EBF4Q9BQW3 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.38■□□□□ 0.37
EBF4Q9BQW3 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
EBF4Q9BQW3 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
EBF4Q9BQW3 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
EBF4Q9BQW3 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.38■□□□□ 0.37
EBF4Q9BQW3 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.38■□□□□ 0.37
EBF4Q9BQW3 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.38■□□□□ 0.37
EBF4Q9BQW3 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
EBF4Q9BQW3 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
EBF4Q9BQW3 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.37■□□□□ 0.37
EBF4Q9BQW3 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.37■□□□□ 0.37
EBF4Q9BQW3 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
EBF4Q9BQW3 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.37■□□□□ 0.37
EBF4Q9BQW3 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.37■□□□□ 0.37
EBF4Q9BQW3 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
EBF4Q9BQW3 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.37■□□□□ 0.37
EBF4Q9BQW3 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
EBF4Q9BQW3 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
EBF4Q9BQW3 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
EBF4Q9BQW3 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
EBF4Q9BQW3 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.37■□□□□ 0.37
EBF4Q9BQW3 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
EBF4Q9BQW3 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.37■□□□□ 0.37
EBF4Q9BQW3 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.37■□□□□ 0.37
EBF4Q9BQW3 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.37■□□□□ 0.37
EBF4Q9BQW3 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
EBF4Q9BQW3 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
EBF4Q9BQW3 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.37■□□□□ 0.37
EBF4Q9BQW3 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
EBF4Q9BQW3 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.37■□□□□ 0.37
EBF4Q9BQW3 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.37■□□□□ 0.37
EBF4Q9BQW3 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.37■□□□□ 0.37
EBF4Q9BQW3 NUDT16P1-203ENST00000513809 620 ntBASIC17.37■□□□□ 0.37
EBF4Q9BQW3 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
EBF4Q9BQW3 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC17.37■□□□□ 0.37
EBF4Q9BQW3 LINC01451-201ENST00000623792 534 ntBASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms